Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04034 and H281DRAFT_04035 are separated by 108 nucleotides H281DRAFT_04035 and H281DRAFT_04036 are separated by 415 nucleotides H281DRAFT_04036 and H281DRAFT_04037 are separated by 62 nucleotides H281DRAFT_04037 and H281DRAFT_04038 are separated by 50 nucleotides
H281DRAFT_04034: H281DRAFT_04034 - tRNA_Gly_CCC, at 135,552 to 135,625
_04034
H281DRAFT_04035: H281DRAFT_04035 - hypothetical protein, at 135,734 to 136,117
_04035
H281DRAFT_04036: H281DRAFT_04036 - tRNA (guanine-N(7)-)-methyltransferase (EC 2.1.1.33), at 136,533 to 137,321
_04036
H281DRAFT_04037: H281DRAFT_04037 - Undecaprenyl-diphosphatase (EC 3.6.1.27), at 137,384 to 138,235
_04037
H281DRAFT_04038: H281DRAFT_04038 - Protein of unknown function (DUF1439), at 138,286 to 138,876
_04038
Position (kb) 136
137
138 Strain fitness (log2 ratio) -2
-1
0
1
2 at 135.542 kb on - strand at 135.562 kb on + strand, within H281DRAFT_04034 at 135.562 kb on + strand, within H281DRAFT_04034 at 135.562 kb on + strand, within H281DRAFT_04034 at 135.565 kb on - strand, within H281DRAFT_04034 at 135.565 kb on - strand, within H281DRAFT_04034 at 135.570 kb on + strand, within H281DRAFT_04034 at 135.571 kb on - strand, within H281DRAFT_04034 at 135.573 kb on + strand, within H281DRAFT_04034 at 135.573 kb on + strand, within H281DRAFT_04034 at 135.573 kb on + strand, within H281DRAFT_04034 at 135.574 kb on - strand, within H281DRAFT_04034 at 135.579 kb on - strand, within H281DRAFT_04034 at 135.591 kb on + strand, within H281DRAFT_04034 at 135.628 kb on + strand at 135.628 kb on + strand at 135.678 kb on + strand at 135.678 kb on + strand at 135.679 kb on - strand at 135.731 kb on - strand at 135.787 kb on - strand, within H281DRAFT_04035 at 135.799 kb on + strand, within H281DRAFT_04035 at 135.801 kb on + strand, within H281DRAFT_04035 at 135.871 kb on - strand, within H281DRAFT_04035 at 136.034 kb on - strand, within H281DRAFT_04035 at 136.034 kb on - strand, within H281DRAFT_04035 at 136.055 kb on - strand, within H281DRAFT_04035 at 136.111 kb on + strand at 136.112 kb on - strand at 136.112 kb on - strand at 136.117 kb on + strand at 136.117 kb on + strand at 136.118 kb on - strand at 136.122 kb on + strand at 136.131 kb on - strand at 136.131 kb on - strand at 136.135 kb on + strand at 136.136 kb on - strand at 136.157 kb on + strand at 136.158 kb on - strand at 136.168 kb on + strand at 136.169 kb on - strand at 136.175 kb on + strand at 136.176 kb on - strand at 136.196 kb on - strand at 136.202 kb on + strand at 136.203 kb on - strand at 136.203 kb on - strand at 136.203 kb on - strand at 136.203 kb on - strand at 136.268 kb on - strand at 136.268 kb on - strand at 136.322 kb on - strand at 136.343 kb on - strand at 136.371 kb on + strand at 136.519 kb on + strand at 136.519 kb on + strand at 136.519 kb on + strand at 136.519 kb on + strand at 136.520 kb on - strand at 136.520 kb on - strand at 137.152 kb on - strand, within H281DRAFT_04036 at 137.152 kb on - strand, within H281DRAFT_04036 at 137.214 kb on + strand, within H281DRAFT_04036 at 137.232 kb on + strand, within H281DRAFT_04036 at 137.319 kb on + strand at 137.320 kb on - strand at 137.386 kb on - strand at 137.410 kb on + strand at 138.321 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 135,542 - -0.1 135,562 + H281DRAFT_04034 0.14 +0.8 135,562 + H281DRAFT_04034 0.14 -0.5 135,562 + H281DRAFT_04034 0.14 -0.1 135,565 - H281DRAFT_04034 0.18 -0.7 135,565 - H281DRAFT_04034 0.18 -0.0 135,570 + H281DRAFT_04034 0.24 +0.6 135,571 - H281DRAFT_04034 0.26 +0.1 135,573 + H281DRAFT_04034 0.28 +0.5 135,573 + H281DRAFT_04034 0.28 -0.4 135,573 + H281DRAFT_04034 0.28 +0.2 135,574 - H281DRAFT_04034 0.30 +1.1 135,579 - H281DRAFT_04034 0.36 +0.4 135,591 + H281DRAFT_04034 0.53 -0.3 135,628 + +0.3 135,628 + -0.6 135,678 + +2.5 135,678 + +0.4 135,679 - -0.6 135,731 - +1.2 135,787 - H281DRAFT_04035 0.14 -0.3 135,799 + H281DRAFT_04035 0.17 -0.7 135,801 + H281DRAFT_04035 0.17 +0.2 135,871 - H281DRAFT_04035 0.36 +0.5 136,034 - H281DRAFT_04035 0.78 +0.3 136,034 - H281DRAFT_04035 0.78 +1.3 136,055 - H281DRAFT_04035 0.84 +0.3 136,111 + +0.9 136,112 - -0.8 136,112 - +0.5 136,117 + -0.1 136,117 + -0.4 136,118 - +0.6 136,122 + -0.4 136,131 - +1.9 136,131 - -0.1 136,135 + +0.4 136,136 - -0.0 136,157 + -0.4 136,158 - -0.8 136,168 + -0.2 136,169 - -0.3 136,175 + +0.5 136,176 - -0.9 136,196 - +0.3 136,202 + +0.6 136,203 - -0.3 136,203 - -1.8 136,203 - +0.2 136,203 - +0.2 136,268 - +0.5 136,268 - +0.3 136,322 - -0.1 136,343 - +0.6 136,371 + -0.3 136,519 + +0.4 136,519 + -0.1 136,519 + +1.5 136,519 + +0.9 136,520 - -0.5 136,520 - -0.1 137,152 - H281DRAFT_04036 0.78 -0.7 137,152 - H281DRAFT_04036 0.78 +0.4 137,214 + H281DRAFT_04036 0.86 +0.9 137,232 + H281DRAFT_04036 0.89 +0.4 137,319 + -0.5 137,320 - -0.6 137,386 - +0.7 137,410 + -0.8 138,321 + -2.0
Or see this region's nucleotide sequence