Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04007 and H281DRAFT_04008 are separated by 221 nucleotides H281DRAFT_04008 and H281DRAFT_04009 overlap by 8 nucleotides H281DRAFT_04009 and H281DRAFT_04010 overlap by 4 nucleotides
H281DRAFT_04007: H281DRAFT_04007 - TIGR00255 family protein, at 110,140 to 111,063
_04007
H281DRAFT_04008: H281DRAFT_04008 - RNAse PH, at 111,285 to 112,025
_04008
H281DRAFT_04009: H281DRAFT_04009 - XTP/dITP diphosphohydrolase, at 112,018 to 112,665
_04009
H281DRAFT_04010: H281DRAFT_04010 - oxygen-independent coproporphyrinogen-3 oxidase, at 112,662 to 113,891
_04010
Position (kb)
111
112
113 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 110.382 kb on - strand, within H281DRAFT_04007 at 110.851 kb on - strand, within H281DRAFT_04007 at 110.851 kb on - strand, within H281DRAFT_04007 at 110.993 kb on - strand at 110.993 kb on - strand at 111.057 kb on - strand at 111.067 kb on - strand at 111.067 kb on - strand at 111.128 kb on - strand at 111.241 kb on - strand at 111.309 kb on - strand at 111.358 kb on - strand at 111.359 kb on + strand, within H281DRAFT_04008 at 111.513 kb on - strand, within H281DRAFT_04008 at 111.772 kb on - strand, within H281DRAFT_04008 at 111.829 kb on - strand, within H281DRAFT_04008 at 112.092 kb on + strand, within H281DRAFT_04009 at 112.092 kb on + strand, within H281DRAFT_04009 at 112.391 kb on + strand, within H281DRAFT_04009 at 112.392 kb on - strand, within H281DRAFT_04009 at 112.417 kb on + strand, within H281DRAFT_04009 at 112.420 kb on + strand, within H281DRAFT_04009 at 112.421 kb on - strand, within H281DRAFT_04009 at 112.421 kb on - strand, within H281DRAFT_04009 at 112.423 kb on + strand, within H281DRAFT_04009 at 112.423 kb on + strand, within H281DRAFT_04009 at 112.424 kb on - strand, within H281DRAFT_04009 at 112.424 kb on - strand, within H281DRAFT_04009 at 112.544 kb on - strand, within H281DRAFT_04009 at 112.544 kb on - strand, within H281DRAFT_04009 at 112.544 kb on - strand, within H281DRAFT_04009 at 112.544 kb on - strand, within H281DRAFT_04009 at 112.767 kb on + strand at 112.767 kb on + strand at 112.767 kb on + strand at 112.767 kb on + strand at 112.768 kb on - strand at 112.768 kb on - strand at 112.858 kb on - strand, within H281DRAFT_04010 at 112.922 kb on + strand, within H281DRAFT_04010 at 112.922 kb on + strand, within H281DRAFT_04010 at 112.923 kb on - strand, within H281DRAFT_04010
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 110,382 - H281DRAFT_04007 0.26 +0.5 110,851 - H281DRAFT_04007 0.77 -1.0 110,851 - H281DRAFT_04007 0.77 +0.6 110,993 - -0.2 110,993 - +0.0 111,057 - -0.3 111,067 - -0.8 111,067 - +0.3 111,128 - +0.4 111,241 - +0.1 111,309 - +1.6 111,358 - +2.0 111,359 + H281DRAFT_04008 0.10 +3.3 111,513 - H281DRAFT_04008 0.31 +1.7 111,772 - H281DRAFT_04008 0.66 +0.8 111,829 - H281DRAFT_04008 0.73 +2.3 112,092 + H281DRAFT_04009 0.11 +0.2 112,092 + H281DRAFT_04009 0.11 +0.5 112,391 + H281DRAFT_04009 0.58 -0.4 112,392 - H281DRAFT_04009 0.58 +0.8 112,417 + H281DRAFT_04009 0.62 -0.3 112,420 + H281DRAFT_04009 0.62 +0.1 112,421 - H281DRAFT_04009 0.62 +0.0 112,421 - H281DRAFT_04009 0.62 -1.8 112,423 + H281DRAFT_04009 0.62 +2.2 112,423 + H281DRAFT_04009 0.62 -1.6 112,424 - H281DRAFT_04009 0.63 +0.2 112,424 - H281DRAFT_04009 0.63 +1.5 112,544 - H281DRAFT_04009 0.81 +0.4 112,544 - H281DRAFT_04009 0.81 +1.7 112,544 - H281DRAFT_04009 0.81 -0.8 112,544 - H281DRAFT_04009 0.81 -0.4 112,767 + -0.7 112,767 + -0.5 112,767 + -1.5 112,767 + -0.9 112,768 - -0.2 112,768 - -0.4 112,858 - H281DRAFT_04010 0.16 +0.5 112,922 + H281DRAFT_04010 0.21 +1.8 112,922 + H281DRAFT_04010 0.21 +0.1 112,923 - H281DRAFT_04010 0.21 -0.7
Or see this region's nucleotide sequence