Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03965 and H281DRAFT_03966 are separated by 120 nucleotides H281DRAFT_03966 and H281DRAFT_03967 are separated by 60 nucleotides H281DRAFT_03967 and H281DRAFT_03968 are separated by 16 nucleotides
H281DRAFT_03965: H281DRAFT_03965 - guanine deaminase, at 71,070 to 72,434
_03965
H281DRAFT_03966: H281DRAFT_03966 - Dehydrogenase (flavoprotein), at 72,555 to 73,868
_03966
H281DRAFT_03967: H281DRAFT_03967 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 73,929 to 74,657
_03967
H281DRAFT_03968: H281DRAFT_03968 - hypothetical protein, at 74,674 to 75,117
_03968
Position (kb) 72
73
74 Strain fitness (log2 ratio) -1
0
1 at 71.682 kb on + strand, within H281DRAFT_03965 at 71.844 kb on + strand, within H281DRAFT_03965 at 71.845 kb on - strand, within H281DRAFT_03965 at 71.857 kb on - strand, within H281DRAFT_03965 at 71.866 kb on - strand, within H281DRAFT_03965 at 71.866 kb on - strand, within H281DRAFT_03965 at 72.026 kb on + strand, within H281DRAFT_03965 at 72.026 kb on + strand, within H281DRAFT_03965 at 72.027 kb on - strand, within H281DRAFT_03965 at 72.153 kb on + strand, within H281DRAFT_03965 at 72.154 kb on - strand, within H281DRAFT_03965 at 72.357 kb on + strand at 72.473 kb on + strand at 72.474 kb on - strand at 72.474 kb on - strand at 72.478 kb on - strand at 72.478 kb on - strand at 72.525 kb on - strand at 72.525 kb on - strand at 72.613 kb on + strand at 72.614 kb on - strand at 72.692 kb on - strand, within H281DRAFT_03966 at 72.721 kb on + strand, within H281DRAFT_03966 at 72.722 kb on - strand, within H281DRAFT_03966 at 73.217 kb on - strand, within H281DRAFT_03966 at 73.217 kb on - strand, within H281DRAFT_03966 at 73.217 kb on - strand, within H281DRAFT_03966 at 73.314 kb on + strand, within H281DRAFT_03966 at 73.314 kb on + strand, within H281DRAFT_03966 at 73.415 kb on + strand, within H281DRAFT_03966 at 73.415 kb on + strand, within H281DRAFT_03966 at 73.416 kb on - strand, within H281DRAFT_03966 at 73.496 kb on - strand, within H281DRAFT_03966 at 73.859 kb on + strand at 73.860 kb on - strand at 73.882 kb on + strand at 73.896 kb on - strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.904 kb on + strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.905 kb on - strand at 73.909 kb on - strand at 73.909 kb on - strand at 74.170 kb on - strand, within H281DRAFT_03967 at 74.409 kb on + strand, within H281DRAFT_03967 at 74.409 kb on + strand, within H281DRAFT_03967 at 74.410 kb on - strand, within H281DRAFT_03967 at 74.410 kb on - strand, within H281DRAFT_03967 at 74.478 kb on + strand, within H281DRAFT_03967 at 74.539 kb on - strand, within H281DRAFT_03967 at 74.778 kb on - strand, within H281DRAFT_03968
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 71,682 + H281DRAFT_03965 0.45 +0.2 71,844 + H281DRAFT_03965 0.57 +0.2 71,845 - H281DRAFT_03965 0.57 -0.8 71,857 - H281DRAFT_03965 0.58 -0.4 71,866 - H281DRAFT_03965 0.58 -0.3 71,866 - H281DRAFT_03965 0.58 -0.7 72,026 + H281DRAFT_03965 0.70 -0.7 72,026 + H281DRAFT_03965 0.70 +0.0 72,027 - H281DRAFT_03965 0.70 -1.6 72,153 + H281DRAFT_03965 0.79 -1.4 72,154 - H281DRAFT_03965 0.79 +0.4 72,357 + -0.4 72,473 + +0.4 72,474 - +0.1 72,474 - +1.1 72,478 - -0.8 72,478 - -0.3 72,525 - +0.6 72,525 - -0.1 72,613 + +1.2 72,614 - +0.8 72,692 - H281DRAFT_03966 0.10 +0.3 72,721 + H281DRAFT_03966 0.13 -0.5 72,722 - H281DRAFT_03966 0.13 +0.0 73,217 - H281DRAFT_03966 0.50 -1.2 73,217 - H281DRAFT_03966 0.50 +1.3 73,217 - H281DRAFT_03966 0.50 -0.6 73,314 + H281DRAFT_03966 0.58 +0.4 73,314 + H281DRAFT_03966 0.58 +0.1 73,415 + H281DRAFT_03966 0.65 +1.2 73,415 + H281DRAFT_03966 0.65 -1.0 73,416 - H281DRAFT_03966 0.66 -0.4 73,496 - H281DRAFT_03966 0.72 +0.8 73,859 + -0.0 73,860 - -1.5 73,882 + +0.1 73,896 - -0.0 73,904 + -0.4 73,904 + -0.5 73,904 + -1.6 73,904 + +0.0 73,904 + -0.2 73,905 - -0.2 73,905 - +0.5 73,905 - -1.2 73,905 - -0.1 73,905 - +0.2 73,905 - +0.0 73,909 - +1.5 73,909 - -0.7 74,170 - H281DRAFT_03967 0.33 -0.8 74,409 + H281DRAFT_03967 0.66 -0.4 74,409 + H281DRAFT_03967 0.66 -0.6 74,410 - H281DRAFT_03967 0.66 -1.0 74,410 - H281DRAFT_03967 0.66 -0.0 74,478 + H281DRAFT_03967 0.75 -0.7 74,539 - H281DRAFT_03967 0.84 +0.1 74,778 - H281DRAFT_03968 0.23 +0.7
Or see this region's nucleotide sequence