Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03957 and H281DRAFT_03958 are separated by 159 nucleotides H281DRAFT_03958 and H281DRAFT_03959 are separated by 62 nucleotides H281DRAFT_03959 and H281DRAFT_03960 are separated by 124 nucleotides
H281DRAFT_03957: H281DRAFT_03957 - D-galactonate transporter, at 59,952 to 61,301
_03957
H281DRAFT_03958: H281DRAFT_03958 - DNA-binding transcriptional regulator, GntR family, at 61,461 to 62,141
_03958
H281DRAFT_03959: H281DRAFT_03959 - aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 62,204 to 63,583
_03959
H281DRAFT_03960: H281DRAFT_03960 - disulfide bond formation protein DsbB, at 63,708 to 64,217
_03960
Position (kb) 62
63
64 Strain fitness (log2 ratio) -2
-1
0
1 at 61.305 kb on - strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.310 kb on + strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.311 kb on - strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.424 kb on + strand at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.771 kb on - strand, within H281DRAFT_03958 at 61.812 kb on + strand, within H281DRAFT_03958 at 61.813 kb on - strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.870 kb on + strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 61.871 kb on - strand, within H281DRAFT_03958 at 62.102 kb on + strand at 62.152 kb on + strand at 62.152 kb on + strand at 62.162 kb on - strand at 62.165 kb on + strand at 62.165 kb on + strand at 62.166 kb on - strand at 62.415 kb on + strand, within H281DRAFT_03959 at 62.415 kb on + strand, within H281DRAFT_03959 at 62.415 kb on + strand, within H281DRAFT_03959 at 62.416 kb on - strand, within H281DRAFT_03959 at 62.552 kb on - strand, within H281DRAFT_03959 at 62.587 kb on + strand, within H281DRAFT_03959 at 62.588 kb on - strand, within H281DRAFT_03959 at 62.664 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.993 kb on + strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 62.994 kb on - strand, within H281DRAFT_03959 at 63.149 kb on + strand, within H281DRAFT_03959 at 63.149 kb on + strand, within H281DRAFT_03959 at 63.150 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.192 kb on - strand, within H281DRAFT_03959 at 63.637 kb on + strand at 63.687 kb on + strand at 63.688 kb on - strand at 64.233 kb on + strand at 64.251 kb on + strand at 64.251 kb on + strand at 64.306 kb on + strand at 64.307 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 61,305 - -1.2 61,310 + -0.9 61,310 + -0.9 61,310 + +0.1 61,311 - -1.0 61,311 - -0.1 61,311 - -1.0 61,424 + -1.6 61,424 + -0.5 61,424 + -0.0 61,771 - H281DRAFT_03958 0.46 -0.9 61,771 - H281DRAFT_03958 0.46 -0.6 61,771 - H281DRAFT_03958 0.46 -0.9 61,812 + H281DRAFT_03958 0.52 -0.4 61,813 - H281DRAFT_03958 0.52 -0.8 61,870 + H281DRAFT_03958 0.60 -0.9 61,870 + H281DRAFT_03958 0.60 -0.1 61,870 + H281DRAFT_03958 0.60 -1.8 61,870 + H281DRAFT_03958 0.60 +0.5 61,870 + H281DRAFT_03958 0.60 -0.3 61,871 - H281DRAFT_03958 0.60 -0.4 61,871 - H281DRAFT_03958 0.60 +0.7 62,102 + +0.3 62,152 + +0.2 62,152 + -0.1 62,162 - -0.6 62,165 + -0.3 62,165 + -0.6 62,166 - -0.8 62,415 + H281DRAFT_03959 0.15 -0.3 62,415 + H281DRAFT_03959 0.15 -0.8 62,415 + H281DRAFT_03959 0.15 -0.9 62,416 - H281DRAFT_03959 0.15 -0.0 62,552 - H281DRAFT_03959 0.25 +0.5 62,587 + H281DRAFT_03959 0.28 -0.3 62,588 - H281DRAFT_03959 0.28 -1.0 62,664 + H281DRAFT_03959 0.33 -1.5 62,993 + H281DRAFT_03959 0.57 +1.1 62,993 + H281DRAFT_03959 0.57 -1.8 62,993 + H281DRAFT_03959 0.57 -0.0 62,993 + H281DRAFT_03959 0.57 +0.3 62,994 - H281DRAFT_03959 0.57 -0.2 62,994 - H281DRAFT_03959 0.57 +0.4 62,994 - H281DRAFT_03959 0.57 +0.9 63,149 + H281DRAFT_03959 0.68 -1.0 63,149 + H281DRAFT_03959 0.68 -0.3 63,150 - H281DRAFT_03959 0.69 -1.7 63,192 - H281DRAFT_03959 0.72 +0.7 63,192 - H281DRAFT_03959 0.72 +0.1 63,192 - H281DRAFT_03959 0.72 -0.4 63,637 + -1.1 63,687 + +0.7 63,688 - +1.0 64,233 + -0.1 64,251 + -0.8 64,251 + +1.0 64,306 + -0.3 64,307 - -0.7
Or see this region's nucleotide sequence