Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03860 and H281DRAFT_03861 are separated by 289 nucleotides H281DRAFT_03861 and H281DRAFT_03862 are separated by 307 nucleotides
H281DRAFT_03860: H281DRAFT_03860 - hypothetical protein, at 389,925 to 390,149
_03860
H281DRAFT_03861: H281DRAFT_03861 - cold-shock DNA-binding protein family, at 390,439 to 390,642
_03861
H281DRAFT_03862: H281DRAFT_03862 - Threonine/homoserine/homoserine lactone efflux protein, at 390,950 to 391,639
_03862
Position (kb) 390
391 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 389.553 kb on + strand at 389.554 kb on - strand at 389.669 kb on - strand at 389.692 kb on + strand at 389.692 kb on + strand at 389.692 kb on + strand at 389.753 kb on + strand at 389.753 kb on + strand at 389.753 kb on + strand at 389.753 kb on + strand at 389.754 kb on - strand at 389.754 kb on - strand at 389.754 kb on - strand at 389.777 kb on - strand at 389.829 kb on + strand at 389.829 kb on + strand at 389.830 kb on - strand at 389.830 kb on - strand at 389.830 kb on - strand at 389.836 kb on - strand at 389.916 kb on - strand at 390.020 kb on - strand, within H281DRAFT_03860 at 390.077 kb on + strand, within H281DRAFT_03860 at 390.078 kb on - strand, within H281DRAFT_03860 at 390.125 kb on - strand, within H281DRAFT_03860 at 390.153 kb on - strand at 390.159 kb on + strand at 390.261 kb on - strand at 390.440 kb on + strand at 390.440 kb on + strand at 390.441 kb on - strand at 390.441 kb on - strand at 390.441 kb on - strand at 390.624 kb on + strand at 390.624 kb on + strand at 390.625 kb on - strand at 390.826 kb on - strand at 391.047 kb on + strand, within H281DRAFT_03862 at 391.048 kb on - strand, within H281DRAFT_03862 at 391.048 kb on - strand, within H281DRAFT_03862 at 391.096 kb on - strand, within H281DRAFT_03862 at 391.096 kb on - strand, within H281DRAFT_03862 at 391.140 kb on + strand, within H281DRAFT_03862 at 391.140 kb on + strand, within H281DRAFT_03862 at 391.183 kb on + strand, within H281DRAFT_03862 at 391.194 kb on + strand, within H281DRAFT_03862 at 391.195 kb on - strand, within H281DRAFT_03862 at 391.228 kb on + strand, within H281DRAFT_03862 at 391.229 kb on - strand, within H281DRAFT_03862 at 391.330 kb on - strand, within H281DRAFT_03862 at 391.338 kb on + strand, within H281DRAFT_03862 at 391.339 kb on - strand, within H281DRAFT_03862 at 391.339 kb on - strand, within H281DRAFT_03862 at 391.368 kb on + strand, within H281DRAFT_03862 at 391.369 kb on - strand, within H281DRAFT_03862 at 391.396 kb on + strand, within H281DRAFT_03862 at 391.396 kb on + strand, within H281DRAFT_03862 at 391.396 kb on + strand, within H281DRAFT_03862 at 391.396 kb on + strand, within H281DRAFT_03862 at 391.397 kb on - strand, within H281DRAFT_03862 at 391.397 kb on - strand, within H281DRAFT_03862 at 391.397 kb on - strand, within H281DRAFT_03862 at 391.399 kb on - strand, within H281DRAFT_03862 at 391.400 kb on + strand, within H281DRAFT_03862 at 391.401 kb on - strand, within H281DRAFT_03862 at 391.424 kb on - strand, within H281DRAFT_03862 at 391.539 kb on - strand, within H281DRAFT_03862 at 391.609 kb on - strand at 391.609 kb on - strand at 391.634 kb on + strand at 391.634 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 389,553 + +0.2 389,554 - +0.2 389,669 - +1.1 389,692 + -0.4 389,692 + -4.1 389,692 + -0.1 389,753 + +1.0 389,753 + -0.7 389,753 + +1.2 389,753 + -0.0 389,754 - +1.1 389,754 - +1.2 389,754 - +0.6 389,777 - +0.3 389,829 + -0.8 389,829 + -1.4 389,830 - +0.5 389,830 - +0.8 389,830 - +1.1 389,836 - -0.0 389,916 - -1.0 390,020 - H281DRAFT_03860 0.42 -0.8 390,077 + H281DRAFT_03860 0.68 +2.0 390,078 - H281DRAFT_03860 0.68 -0.3 390,125 - H281DRAFT_03860 0.89 -0.3 390,153 - -0.5 390,159 + -0.3 390,261 - +0.2 390,440 + -0.2 390,440 + +0.6 390,441 - +0.4 390,441 - -0.2 390,441 - +1.0 390,624 + -0.2 390,624 + -0.6 390,625 - +0.6 390,826 - +1.1 391,047 + H281DRAFT_03862 0.14 -0.9 391,048 - H281DRAFT_03862 0.14 +0.7 391,048 - H281DRAFT_03862 0.14 -0.8 391,096 - H281DRAFT_03862 0.21 +0.5 391,096 - H281DRAFT_03862 0.21 +0.2 391,140 + H281DRAFT_03862 0.28 +0.7 391,140 + H281DRAFT_03862 0.28 +0.4 391,183 + H281DRAFT_03862 0.34 -0.4 391,194 + H281DRAFT_03862 0.35 -3.3 391,195 - H281DRAFT_03862 0.36 +0.2 391,228 + H281DRAFT_03862 0.40 -0.3 391,229 - H281DRAFT_03862 0.40 +0.2 391,330 - H281DRAFT_03862 0.55 +1.3 391,338 + H281DRAFT_03862 0.56 -0.3 391,339 - H281DRAFT_03862 0.56 +0.1 391,339 - H281DRAFT_03862 0.56 +1.1 391,368 + H281DRAFT_03862 0.61 -0.2 391,369 - H281DRAFT_03862 0.61 -0.9 391,396 + H281DRAFT_03862 0.65 +0.0 391,396 + H281DRAFT_03862 0.65 -0.0 391,396 + H281DRAFT_03862 0.65 +0.4 391,396 + H281DRAFT_03862 0.65 +0.7 391,397 - H281DRAFT_03862 0.65 +0.6 391,397 - H281DRAFT_03862 0.65 +1.4 391,397 - H281DRAFT_03862 0.65 +1.0 391,399 - H281DRAFT_03862 0.65 +1.6 391,400 + H281DRAFT_03862 0.65 +0.2 391,401 - H281DRAFT_03862 0.65 +0.1 391,424 - H281DRAFT_03862 0.69 +0.0 391,539 - H281DRAFT_03862 0.85 +0.9 391,609 - -0.1 391,609 - +1.1 391,634 + +1.1 391,634 + +0.5
Or see this region's nucleotide sequence