Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03708 and H281DRAFT_03709 overlap by 4 nucleotides H281DRAFT_03709 and H281DRAFT_03710 are separated by 71 nucleotides
H281DRAFT_03708: H281DRAFT_03708 - hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4), at 222,184 to 223,170
_03708
H281DRAFT_03709: H281DRAFT_03709 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 223,167 to 224,441
_03709
H281DRAFT_03710: H281DRAFT_03710 - Nitrate/nitrite transporter NarK, at 224,513 to 225,820
_03710
Position (kb) 223
224
225 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 222.180 kb on + strand at 222.180 kb on + strand at 222.181 kb on - strand at 222.323 kb on + strand, within H281DRAFT_03708 at 222.374 kb on + strand, within H281DRAFT_03708 at 222.402 kb on + strand, within H281DRAFT_03708 at 222.851 kb on + strand, within H281DRAFT_03708 at 222.851 kb on + strand, within H281DRAFT_03708 at 223.016 kb on + strand, within H281DRAFT_03708 at 223.064 kb on - strand, within H281DRAFT_03708 at 223.248 kb on - strand at 223.566 kb on + strand, within H281DRAFT_03709 at 223.567 kb on - strand, within H281DRAFT_03709 at 223.620 kb on + strand, within H281DRAFT_03709 at 223.620 kb on + strand, within H281DRAFT_03709 at 223.620 kb on + strand, within H281DRAFT_03709 at 223.620 kb on + strand, within H281DRAFT_03709 at 223.620 kb on + strand, within H281DRAFT_03709 at 223.621 kb on - strand, within H281DRAFT_03709 at 223.621 kb on - strand, within H281DRAFT_03709 at 223.621 kb on - strand, within H281DRAFT_03709 at 223.621 kb on - strand, within H281DRAFT_03709 at 223.621 kb on - strand, within H281DRAFT_03709 at 223.621 kb on - strand, within H281DRAFT_03709 at 223.622 kb on + strand, within H281DRAFT_03709 at 223.622 kb on + strand, within H281DRAFT_03709 at 223.622 kb on + strand, within H281DRAFT_03709 at 223.870 kb on - strand, within H281DRAFT_03709 at 224.106 kb on + strand, within H281DRAFT_03709 at 224.222 kb on + strand, within H281DRAFT_03709 at 224.500 kb on + strand at 224.500 kb on + strand at 224.636 kb on + strand at 224.637 kb on - strand at 225.115 kb on - strand, within H281DRAFT_03710 at 225.115 kb on - strand, within H281DRAFT_03710
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 222,180 + -1.0 222,180 + -0.9 222,181 - +0.8 222,323 + H281DRAFT_03708 0.14 -0.1 222,374 + H281DRAFT_03708 0.19 -0.2 222,402 + H281DRAFT_03708 0.22 -0.7 222,851 + H281DRAFT_03708 0.68 -1.1 222,851 + H281DRAFT_03708 0.68 -1.2 223,016 + H281DRAFT_03708 0.84 +0.2 223,064 - H281DRAFT_03708 0.89 +0.2 223,248 - +0.5 223,566 + H281DRAFT_03709 0.31 +1.0 223,567 - H281DRAFT_03709 0.31 +2.6 223,620 + H281DRAFT_03709 0.36 -0.8 223,620 + H281DRAFT_03709 0.36 +1.1 223,620 + H281DRAFT_03709 0.36 +1.8 223,620 + H281DRAFT_03709 0.36 -1.5 223,620 + H281DRAFT_03709 0.36 +0.0 223,621 - H281DRAFT_03709 0.36 +0.4 223,621 - H281DRAFT_03709 0.36 -2.3 223,621 - H281DRAFT_03709 0.36 +0.7 223,621 - H281DRAFT_03709 0.36 +0.5 223,621 - H281DRAFT_03709 0.36 -0.6 223,621 - H281DRAFT_03709 0.36 +0.7 223,622 + H281DRAFT_03709 0.36 +0.4 223,622 + H281DRAFT_03709 0.36 -0.6 223,622 + H281DRAFT_03709 0.36 +1.6 223,870 - H281DRAFT_03709 0.55 -0.6 224,106 + H281DRAFT_03709 0.74 -0.4 224,222 + H281DRAFT_03709 0.83 +0.4 224,500 + +0.8 224,500 + -1.3 224,636 + -0.3 224,637 - +3.2 225,115 - H281DRAFT_03710 0.46 +0.9 225,115 - H281DRAFT_03710 0.46 -1.5
Or see this region's nucleotide sequence