Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03605 and H281DRAFT_03606 overlap by 8 nucleotides H281DRAFT_03606 and H281DRAFT_03607 overlap by 4 nucleotides
H281DRAFT_03605: H281DRAFT_03605 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 114,592 to 114,960
_03605
H281DRAFT_03606: H281DRAFT_03606 - CheC, inhibitor of MCP methylation, at 114,953 to 115,576
_03606
H281DRAFT_03607: H281DRAFT_03607 - PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein, at 115,573 to 116,511
_03607
Position (kb)
114
115
116 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 113.984 kb on + strand at 113.985 kb on - strand at 113.985 kb on - strand at 114.013 kb on + strand at 114.042 kb on + strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.043 kb on - strand at 114.058 kb on - strand at 114.088 kb on + strand at 114.165 kb on + strand at 114.166 kb on - strand at 114.192 kb on + strand at 114.193 kb on - strand at 114.250 kb on + strand at 114.293 kb on + strand at 114.369 kb on + strand at 114.370 kb on - strand at 114.395 kb on + strand at 114.396 kb on - strand at 114.396 kb on - strand at 114.396 kb on - strand at 114.396 kb on - strand at 114.495 kb on - strand at 114.495 kb on - strand at 114.571 kb on + strand at 114.571 kb on + strand at 114.572 kb on - strand at 114.572 kb on - strand at 114.685 kb on + strand, within H281DRAFT_03605 at 114.685 kb on + strand, within H281DRAFT_03605 at 114.685 kb on + strand, within H281DRAFT_03605 at 114.685 kb on + strand, within H281DRAFT_03605 at 114.718 kb on + strand, within H281DRAFT_03605 at 114.719 kb on - strand, within H281DRAFT_03605 at 114.779 kb on - strand, within H281DRAFT_03605 at 114.870 kb on - strand, within H281DRAFT_03605 at 114.924 kb on - strand at 114.943 kb on + strand at 114.944 kb on - strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.952 kb on + strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 114.953 kb on - strand at 115.068 kb on + strand, within H281DRAFT_03606 at 115.069 kb on - strand, within H281DRAFT_03606 at 115.136 kb on - strand, within H281DRAFT_03606 at 115.253 kb on + strand, within H281DRAFT_03606 at 115.254 kb on - strand, within H281DRAFT_03606 at 115.268 kb on + strand, within H281DRAFT_03606 at 115.584 kb on + strand at 115.677 kb on + strand, within H281DRAFT_03607 at 115.677 kb on + strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.678 kb on - strand, within H281DRAFT_03607 at 115.797 kb on + strand, within H281DRAFT_03607 at 115.797 kb on + strand, within H281DRAFT_03607 at 115.798 kb on - strand, within H281DRAFT_03607 at 115.831 kb on + strand, within H281DRAFT_03607 at 115.831 kb on + strand, within H281DRAFT_03607 at 115.831 kb on + strand, within H281DRAFT_03607 at 115.832 kb on - strand, within H281DRAFT_03607 at 115.832 kb on - strand, within H281DRAFT_03607 at 115.832 kb on - strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607 at 115.879 kb on + strand, within H281DRAFT_03607 at 116.018 kb on - strand, within H281DRAFT_03607 at 116.086 kb on + strand, within H281DRAFT_03607 at 116.086 kb on + strand, within H281DRAFT_03607 at 116.105 kb on - strand, within H281DRAFT_03607 at 116.428 kb on + strand at 116.429 kb on - strand at 116.429 kb on - strand at 116.464 kb on + strand at 116.509 kb on + strand at 116.509 kb on + strand at 116.509 kb on + strand at 116.536 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 113,984 + -1.2 113,985 - +2.1 113,985 - +1.5 114,013 + +0.2 114,042 + -0.8 114,043 - -0.6 114,043 - +0.4 114,043 - -2.1 114,043 - -0.3 114,043 - -1.2 114,058 - -2.1 114,088 + -0.4 114,165 + -0.5 114,166 - -0.5 114,192 + -0.6 114,193 - +0.4 114,250 + +0.2 114,293 + -1.0 114,369 + -0.8 114,370 - +1.4 114,395 + -0.1 114,396 - +0.8 114,396 - +1.6 114,396 - +0.2 114,396 - +0.6 114,495 - +0.6 114,495 - +1.6 114,571 + -0.8 114,571 + +0.1 114,572 - -0.3 114,572 - +1.2 114,685 + H281DRAFT_03605 0.25 -0.4 114,685 + H281DRAFT_03605 0.25 +0.4 114,685 + H281DRAFT_03605 0.25 +0.2 114,685 + H281DRAFT_03605 0.25 +1.2 114,718 + H281DRAFT_03605 0.34 +0.1 114,719 - H281DRAFT_03605 0.34 +0.5 114,779 - H281DRAFT_03605 0.51 +0.4 114,870 - H281DRAFT_03605 0.75 +0.3 114,924 - +1.4 114,943 + -2.5 114,944 - +0.0 114,952 + -0.5 114,952 + -0.6 114,952 + +0.2 114,952 + +0.2 114,952 + +1.1 114,952 + -1.4 114,952 + +0.6 114,952 + -0.3 114,952 + -0.3 114,953 - -0.1 114,953 - +1.4 114,953 - +0.1 114,953 - +1.7 114,953 - +0.7 114,953 - +0.7 115,068 + H281DRAFT_03606 0.18 +0.7 115,069 - H281DRAFT_03606 0.19 +0.7 115,136 - H281DRAFT_03606 0.29 +0.5 115,253 + H281DRAFT_03606 0.48 -0.6 115,254 - H281DRAFT_03606 0.48 -0.6 115,268 + H281DRAFT_03606 0.50 +0.1 115,584 + -0.2 115,677 + H281DRAFT_03607 0.11 -0.3 115,677 + H281DRAFT_03607 0.11 +0.5 115,678 - H281DRAFT_03607 0.11 +1.0 115,678 - H281DRAFT_03607 0.11 -1.1 115,678 - H281DRAFT_03607 0.11 +0.1 115,678 - H281DRAFT_03607 0.11 +0.1 115,678 - H281DRAFT_03607 0.11 -0.8 115,797 + H281DRAFT_03607 0.24 -0.1 115,797 + H281DRAFT_03607 0.24 +1.2 115,798 - H281DRAFT_03607 0.24 -1.4 115,831 + H281DRAFT_03607 0.27 -0.8 115,831 + H281DRAFT_03607 0.27 -0.4 115,831 + H281DRAFT_03607 0.27 +0.2 115,832 - H281DRAFT_03607 0.28 -0.5 115,832 - H281DRAFT_03607 0.28 +0.8 115,832 - H281DRAFT_03607 0.28 +0.5 115,879 + H281DRAFT_03607 0.33 +0.1 115,879 + H281DRAFT_03607 0.33 +0.3 115,879 + H281DRAFT_03607 0.33 -0.1 115,879 + H281DRAFT_03607 0.33 +1.7 116,018 - H281DRAFT_03607 0.47 +1.5 116,086 + H281DRAFT_03607 0.55 -0.1 116,086 + H281DRAFT_03607 0.55 +0.0 116,105 - H281DRAFT_03607 0.57 +0.8 116,428 + -0.5 116,429 - +0.2 116,429 - +0.5 116,464 + -0.6 116,509 + -0.2 116,509 + +0.0 116,509 + -0.7 116,536 + -0.7
Or see this region's nucleotide sequence