Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03548 and H281DRAFT_03549 are separated by 102 nucleotides H281DRAFT_03549 and H281DRAFT_03550 are separated by 48 nucleotides
H281DRAFT_03548: H281DRAFT_03548 - H+/gluconate symporter, at 49,134 to 50,534
_03548
H281DRAFT_03549: H281DRAFT_03549 - reactive intermediate/imine deaminase, at 50,637 to 51,038
_03549
H281DRAFT_03550: H281DRAFT_03550 - two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC, at 51,087 to 54,605
_03550
Position (kb) 50
51
52 Strain fitness (log2 ratio) -1
0
1 at 49.767 kb on + strand, within H281DRAFT_03548 at 49.767 kb on + strand, within H281DRAFT_03548 at 49.911 kb on + strand, within H281DRAFT_03548 at 49.911 kb on + strand, within H281DRAFT_03548 at 49.911 kb on + strand, within H281DRAFT_03548 at 49.911 kb on + strand, within H281DRAFT_03548 at 49.911 kb on + strand, within H281DRAFT_03548 at 49.913 kb on + strand, within H281DRAFT_03548 at 50.115 kb on - strand, within H281DRAFT_03548 at 50.127 kb on + strand, within H281DRAFT_03548 at 50.127 kb on + strand, within H281DRAFT_03548 at 50.328 kb on - strand, within H281DRAFT_03548 at 50.394 kb on - strand, within H281DRAFT_03548 at 50.449 kb on - strand at 50.512 kb on - strand at 50.514 kb on + strand at 50.532 kb on + strand at 50.788 kb on + strand, within H281DRAFT_03549 at 50.904 kb on + strand, within H281DRAFT_03549 at 50.934 kb on + strand, within H281DRAFT_03549 at 50.935 kb on - strand, within H281DRAFT_03549 at 51.201 kb on + strand at 51.202 kb on - strand at 51.202 kb on - strand at 51.209 kb on + strand at 51.209 kb on + strand at 51.209 kb on + strand at 51.315 kb on + strand at 51.658 kb on - strand, within H281DRAFT_03550 at 51.957 kb on + strand, within H281DRAFT_03550
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 49,767 + H281DRAFT_03548 0.45 +0.2 49,767 + H281DRAFT_03548 0.45 +0.9 49,911 + H281DRAFT_03548 0.55 +0.0 49,911 + H281DRAFT_03548 0.55 -0.8 49,911 + H281DRAFT_03548 0.55 -0.0 49,911 + H281DRAFT_03548 0.55 +0.7 49,911 + H281DRAFT_03548 0.55 -0.1 49,913 + H281DRAFT_03548 0.56 +0.6 50,115 - H281DRAFT_03548 0.70 +0.2 50,127 + H281DRAFT_03548 0.71 -0.9 50,127 + H281DRAFT_03548 0.71 +0.2 50,328 - H281DRAFT_03548 0.85 +0.2 50,394 - H281DRAFT_03548 0.90 +0.2 50,449 - +0.4 50,512 - +0.4 50,514 + +0.5 50,532 + -0.3 50,788 + H281DRAFT_03549 0.38 +0.2 50,904 + H281DRAFT_03549 0.66 +0.2 50,934 + H281DRAFT_03549 0.74 +0.4 50,935 - H281DRAFT_03549 0.74 +0.9 51,201 + -0.3 51,202 - -0.0 51,202 - +1.1 51,209 + +1.1 51,209 + -0.7 51,209 + -0.2 51,315 + +0.1 51,658 - H281DRAFT_03550 0.16 +1.3 51,957 + H281DRAFT_03550 0.25 +1.4
Or see this region's nucleotide sequence