Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03527 and H281DRAFT_03528 are separated by 39 nucleotides H281DRAFT_03528 and H281DRAFT_03529 are separated by 78 nucleotides H281DRAFT_03529 and H281DRAFT_03530 are separated by 39 nucleotides H281DRAFT_03530 and H281DRAFT_03531 overlap by 4 nucleotides
H281DRAFT_03527: H281DRAFT_03527 - uncharacterized domain 1-containing protein, at 26,210 to 26,644
_03527
H281DRAFT_03528: H281DRAFT_03528 - ureidoglycolate lyase, at 26,684 to 27,532
_03528
H281DRAFT_03529: H281DRAFT_03529 - 2-keto-3-deoxy-L-fuconate dehydrogenase, at 27,611 to 28,354
_03529
H281DRAFT_03530: H281DRAFT_03530 - L-fuconolactonase, at 28,394 to 29,236
_03530
H281DRAFT_03531: H281DRAFT_03531 - D-threo-aldose 1-dehydrogenase, at 29,233 to 30,273
_03531
Position (kb) 27
28
29 Strain fitness (log2 ratio) -1
0
1 at 26.697 kb on + strand at 26.698 kb on - strand at 26.763 kb on + strand at 26.763 kb on + strand at 26.764 kb on - strand at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.856 kb on + strand, within H281DRAFT_03528 at 26.857 kb on - strand, within H281DRAFT_03528 at 27.085 kb on - strand, within H281DRAFT_03528 at 27.096 kb on + strand, within H281DRAFT_03528 at 27.096 kb on + strand, within H281DRAFT_03528 at 27.097 kb on - strand, within H281DRAFT_03528 at 27.123 kb on + strand, within H281DRAFT_03528 at 27.123 kb on + strand, within H281DRAFT_03528 at 27.123 kb on + strand, within H281DRAFT_03528 at 27.124 kb on - strand, within H281DRAFT_03528 at 27.124 kb on - strand, within H281DRAFT_03528 at 27.124 kb on - strand, within H281DRAFT_03528 at 27.295 kb on - strand, within H281DRAFT_03528 at 27.447 kb on - strand, within H281DRAFT_03528 at 27.447 kb on - strand, within H281DRAFT_03528 at 27.571 kb on + strand at 27.571 kb on + strand at 27.571 kb on + strand at 27.571 kb on + strand at 27.605 kb on + strand at 27.605 kb on + strand at 27.848 kb on - strand, within H281DRAFT_03529 at 27.854 kb on + strand, within H281DRAFT_03529 at 27.854 kb on + strand, within H281DRAFT_03529 at 27.854 kb on + strand, within H281DRAFT_03529 at 27.854 kb on + strand, within H281DRAFT_03529 at 27.924 kb on + strand, within H281DRAFT_03529 at 27.924 kb on + strand, within H281DRAFT_03529 at 27.925 kb on - strand, within H281DRAFT_03529 at 27.973 kb on + strand, within H281DRAFT_03529 at 27.973 kb on + strand, within H281DRAFT_03529 at 27.974 kb on - strand, within H281DRAFT_03529 at 27.974 kb on - strand, within H281DRAFT_03529 at 27.974 kb on - strand, within H281DRAFT_03529 at 27.974 kb on - strand, within H281DRAFT_03529 at 27.974 kb on - strand, within H281DRAFT_03529 at 27.974 kb on - strand, within H281DRAFT_03529 at 28.035 kb on + strand, within H281DRAFT_03529 at 28.378 kb on - strand at 28.561 kb on + strand, within H281DRAFT_03530 at 28.562 kb on - strand, within H281DRAFT_03530 at 28.806 kb on + strand, within H281DRAFT_03530 at 28.807 kb on - strand, within H281DRAFT_03530 at 29.040 kb on + strand, within H281DRAFT_03530 at 29.142 kb on + strand, within H281DRAFT_03530 at 29.176 kb on - strand at 29.176 kb on - strand at 29.176 kb on - strand at 29.199 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 26,697 + -0.1 26,698 - +0.1 26,763 + -0.4 26,763 + -0.1 26,764 - +0.1 26,856 + H281DRAFT_03528 0.20 -1.0 26,856 + H281DRAFT_03528 0.20 -0.3 26,856 + H281DRAFT_03528 0.20 -0.7 26,856 + H281DRAFT_03528 0.20 +0.6 26,856 + H281DRAFT_03528 0.20 +0.4 26,857 - H281DRAFT_03528 0.20 -0.5 27,085 - H281DRAFT_03528 0.47 -0.0 27,096 + H281DRAFT_03528 0.49 -0.1 27,096 + H281DRAFT_03528 0.49 +0.1 27,097 - H281DRAFT_03528 0.49 +0.4 27,123 + H281DRAFT_03528 0.52 +0.8 27,123 + H281DRAFT_03528 0.52 +0.1 27,123 + H281DRAFT_03528 0.52 -0.8 27,124 - H281DRAFT_03528 0.52 -0.0 27,124 - H281DRAFT_03528 0.52 -0.1 27,124 - H281DRAFT_03528 0.52 -0.2 27,295 - H281DRAFT_03528 0.72 -1.5 27,447 - H281DRAFT_03528 0.90 -0.6 27,447 - H281DRAFT_03528 0.90 -0.5 27,571 + +0.2 27,571 + +0.1 27,571 + +0.6 27,571 + +0.2 27,605 + +0.2 27,605 + -0.2 27,848 - H281DRAFT_03529 0.32 +0.6 27,854 + H281DRAFT_03529 0.33 +0.7 27,854 + H281DRAFT_03529 0.33 -0.1 27,854 + H281DRAFT_03529 0.33 -0.5 27,854 + H281DRAFT_03529 0.33 +0.9 27,924 + H281DRAFT_03529 0.42 +0.7 27,924 + H281DRAFT_03529 0.42 +0.7 27,925 - H281DRAFT_03529 0.42 +0.7 27,973 + H281DRAFT_03529 0.49 -0.4 27,973 + H281DRAFT_03529 0.49 +0.2 27,974 - H281DRAFT_03529 0.49 +0.7 27,974 - H281DRAFT_03529 0.49 -0.5 27,974 - H281DRAFT_03529 0.49 +0.6 27,974 - H281DRAFT_03529 0.49 -0.8 27,974 - H281DRAFT_03529 0.49 +0.2 27,974 - H281DRAFT_03529 0.49 +1.0 28,035 + H281DRAFT_03529 0.57 +0.9 28,378 - +0.4 28,561 + H281DRAFT_03530 0.20 +0.1 28,562 - H281DRAFT_03530 0.20 -1.6 28,806 + H281DRAFT_03530 0.49 +1.0 28,807 - H281DRAFT_03530 0.49 +0.6 29,040 + H281DRAFT_03530 0.77 -0.8 29,142 + H281DRAFT_03530 0.89 +0.6 29,176 - +0.7 29,176 - +0.6 29,176 - +0.4 29,199 + +0.2
Or see this region's nucleotide sequence