Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03481

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03480 and H281DRAFT_03481 are separated by 836 nucleotidesH281DRAFT_03481 and H281DRAFT_03482 are separated by 200 nucleotides H281DRAFT_03480: H281DRAFT_03480 - 4-hydroxybenzoate polyprenyltransferase, at 562,751 to 564,172 _03480 H281DRAFT_03481: H281DRAFT_03481 - PAP2 superfamily protein, at 565,009 to 565,344 _03481 H281DRAFT_03482: H281DRAFT_03482 - hypothetical protein, at 565,545 to 567,110 _03482 Position (kb) 565 566Strain fitness (log2 ratio) -1 0 1at 564.362 kb on + strandat 564.363 kb on - strandat 564.746 kb on - strandat 565.040 kb on - strandat 565.467 kb on - strandat 565.674 kb on + strandat 565.675 kb on - strandat 566.113 kb on + strand, within H281DRAFT_03482at 566.280 kb on - strand, within H281DRAFT_03482at 566.281 kb on + strand, within H281DRAFT_03482at 566.282 kb on - strand, within H281DRAFT_03482

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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564,362 + -0.2
564,363 - +0.0
564,746 - +0.5
565,040 - +0.6
565,467 - -0.4
565,674 + -0.2
565,675 - +0.3
566,113 + H281DRAFT_03482 0.36 +0.1
566,280 - H281DRAFT_03482 0.47 +0.0
566,281 + H281DRAFT_03482 0.47 -0.7
566,282 - H281DRAFT_03482 0.47 +0.6

Or see this region's nucleotide sequence