Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03470 and H281DRAFT_03471 overlap by 4 nucleotides H281DRAFT_03471 and H281DRAFT_03472 are separated by 349 nucleotides H281DRAFT_03472 and H281DRAFT_03473 are separated by 154 nucleotides
H281DRAFT_03470: H281DRAFT_03470 - kumamolisin. Serine peptidase. MEROPS family S53, at 552,941 to 554,560
_03470
H281DRAFT_03471: H281DRAFT_03471 - Carboxypeptidase C (cathepsin A), at 554,557 to 556,212
_03471
H281DRAFT_03472: H281DRAFT_03472 - hypothetical protein, at 556,562 to 557,014
_03472
H281DRAFT_03473: H281DRAFT_03473 - hypothetical protein, at 557,169 to 557,528
_03473
Position (kb) 554
555
556
557 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 553.586 kb on + strand, within H281DRAFT_03470 at 553.586 kb on + strand, within H281DRAFT_03470 at 553.691 kb on - strand, within H281DRAFT_03470 at 554.007 kb on - strand, within H281DRAFT_03470 at 554.007 kb on - strand, within H281DRAFT_03470 at 554.010 kb on + strand, within H281DRAFT_03470 at 554.011 kb on - strand, within H281DRAFT_03470 at 554.372 kb on + strand, within H281DRAFT_03470 at 554.373 kb on - strand, within H281DRAFT_03470 at 554.374 kb on + strand, within H281DRAFT_03470 at 554.375 kb on - strand, within H281DRAFT_03470 at 554.496 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.501 kb on - strand at 554.501 kb on - strand at 554.501 kb on - strand at 554.683 kb on + strand at 554.776 kb on + strand, within H281DRAFT_03471 at 554.777 kb on - strand, within H281DRAFT_03471 at 554.845 kb on + strand, within H281DRAFT_03471 at 554.846 kb on - strand, within H281DRAFT_03471 at 554.902 kb on + strand, within H281DRAFT_03471 at 554.903 kb on - strand, within H281DRAFT_03471 at 554.903 kb on - strand, within H281DRAFT_03471 at 555.011 kb on + strand, within H281DRAFT_03471 at 555.012 kb on - strand, within H281DRAFT_03471 at 555.220 kb on + strand, within H281DRAFT_03471 at 555.234 kb on + strand, within H281DRAFT_03471 at 555.289 kb on - strand, within H281DRAFT_03471 at 555.289 kb on - strand, within H281DRAFT_03471 at 555.593 kb on + strand, within H281DRAFT_03471 at 555.640 kb on + strand, within H281DRAFT_03471 at 555.739 kb on + strand, within H281DRAFT_03471 at 555.760 kb on + strand, within H281DRAFT_03471 at 555.760 kb on + strand, within H281DRAFT_03471 at 555.781 kb on + strand, within H281DRAFT_03471 at 555.782 kb on - strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.899 kb on + strand, within H281DRAFT_03471 at 555.901 kb on + strand, within H281DRAFT_03471 at 555.901 kb on + strand, within H281DRAFT_03471 at 555.994 kb on + strand, within H281DRAFT_03471 at 555.994 kb on + strand, within H281DRAFT_03471 at 555.995 kb on - strand, within H281DRAFT_03471 at 556.141 kb on + strand at 556.141 kb on + strand at 556.179 kb on + strand at 556.211 kb on - strand at 556.346 kb on + strand at 556.428 kb on + strand at 556.428 kb on + strand at 556.428 kb on + strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.429 kb on - strand at 556.432 kb on + strand at 556.433 kb on - strand at 556.606 kb on - strand at 556.620 kb on - strand, within H281DRAFT_03472 at 557.152 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 553,586 + H281DRAFT_03470 0.40 -1.0 553,586 + H281DRAFT_03470 0.40 -0.5 553,691 - H281DRAFT_03470 0.46 -0.1 554,007 - H281DRAFT_03470 0.66 +0.6 554,007 - H281DRAFT_03470 0.66 +0.2 554,010 + H281DRAFT_03470 0.66 -1.0 554,011 - H281DRAFT_03470 0.66 -0.0 554,372 + H281DRAFT_03470 0.88 +1.1 554,373 - H281DRAFT_03470 0.88 -1.0 554,374 + H281DRAFT_03470 0.88 -0.3 554,375 - H281DRAFT_03470 0.89 -0.2 554,496 + +0.0 554,498 + +0.2 554,498 + +0.4 554,498 + -0.6 554,498 + +0.7 554,498 + +2.5 554,498 + +0.2 554,498 + -0.2 554,499 - -0.1 554,499 - -0.5 554,499 - -0.0 554,499 - +0.7 554,499 - +0.5 554,500 + -0.0 554,500 + +2.5 554,500 + -0.1 554,500 + +0.2 554,500 + +0.5 554,501 - +0.2 554,501 - +0.2 554,501 - +0.3 554,683 + +0.1 554,776 + H281DRAFT_03471 0.13 +0.2 554,777 - H281DRAFT_03471 0.13 +1.2 554,845 + H281DRAFT_03471 0.17 -0.2 554,846 - H281DRAFT_03471 0.17 +0.1 554,902 + H281DRAFT_03471 0.21 -0.0 554,903 - H281DRAFT_03471 0.21 -0.4 554,903 - H281DRAFT_03471 0.21 -0.4 555,011 + H281DRAFT_03471 0.27 -0.2 555,012 - H281DRAFT_03471 0.27 -0.2 555,220 + H281DRAFT_03471 0.40 +0.2 555,234 + H281DRAFT_03471 0.41 +0.4 555,289 - H281DRAFT_03471 0.44 +1.6 555,289 - H281DRAFT_03471 0.44 -0.2 555,593 + H281DRAFT_03471 0.63 -1.0 555,640 + H281DRAFT_03471 0.65 +0.9 555,739 + H281DRAFT_03471 0.71 +0.5 555,760 + H281DRAFT_03471 0.73 +0.1 555,760 + H281DRAFT_03471 0.73 -2.7 555,781 + H281DRAFT_03471 0.74 +0.2 555,782 - H281DRAFT_03471 0.74 +0.7 555,899 + H281DRAFT_03471 0.81 -1.2 555,899 + H281DRAFT_03471 0.81 +0.2 555,899 + H281DRAFT_03471 0.81 +0.3 555,901 + H281DRAFT_03471 0.81 -0.1 555,901 + H281DRAFT_03471 0.81 -2.2 555,994 + H281DRAFT_03471 0.87 +0.4 555,994 + H281DRAFT_03471 0.87 -0.8 555,995 - H281DRAFT_03471 0.87 -1.0 556,141 + +0.9 556,141 + +0.1 556,179 + -0.4 556,211 - +0.4 556,346 + -2.9 556,428 + +1.9 556,428 + -1.0 556,428 + +0.0 556,429 - -0.0 556,429 - +0.7 556,429 - -1.9 556,429 - +0.4 556,429 - -1.2 556,429 - +0.1 556,429 - -0.4 556,432 + -1.7 556,433 - -0.2 556,606 - +1.2 556,620 - H281DRAFT_03472 0.13 -0.1 557,152 - -0.8
Or see this region's nucleotide sequence