Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03468 and H281DRAFT_03469 are separated by 82 nucleotides H281DRAFT_03469 and H281DRAFT_03470 are separated by 308 nucleotides H281DRAFT_03470 and H281DRAFT_03471 overlap by 4 nucleotides
H281DRAFT_03468: H281DRAFT_03468 - small multidrug resistance family-3 protein, at 551,720 to 552,040
_03468
H281DRAFT_03469: H281DRAFT_03469 - hypothetical protein, at 552,123 to 552,632
_03469
H281DRAFT_03470: H281DRAFT_03470 - kumamolisin. Serine peptidase. MEROPS family S53, at 552,941 to 554,560
_03470
H281DRAFT_03471: H281DRAFT_03471 - Carboxypeptidase C (cathepsin A), at 554,557 to 556,212
_03471
Position (kb) 552
553
554
555 Strain fitness (log2 ratio) -2
-1
0
1
2 at 551.965 kb on + strand, within H281DRAFT_03468 at 551.965 kb on + strand, within H281DRAFT_03468 at 551.966 kb on - strand, within H281DRAFT_03468 at 552.142 kb on + strand at 552.238 kb on + strand, within H281DRAFT_03469 at 552.238 kb on + strand, within H281DRAFT_03469 at 552.338 kb on - strand, within H281DRAFT_03469 at 552.338 kb on - strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.460 kb on + strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.461 kb on - strand, within H281DRAFT_03469 at 552.617 kb on - strand at 552.684 kb on - strand at 552.684 kb on - strand at 552.684 kb on - strand at 552.684 kb on - strand at 552.981 kb on + strand at 552.982 kb on - strand at 553.149 kb on - strand, within H281DRAFT_03470 at 553.499 kb on + strand, within H281DRAFT_03470 at 553.586 kb on + strand, within H281DRAFT_03470 at 553.586 kb on + strand, within H281DRAFT_03470 at 553.691 kb on - strand, within H281DRAFT_03470 at 554.007 kb on - strand, within H281DRAFT_03470 at 554.007 kb on - strand, within H281DRAFT_03470 at 554.010 kb on + strand, within H281DRAFT_03470 at 554.011 kb on - strand, within H281DRAFT_03470 at 554.372 kb on + strand, within H281DRAFT_03470 at 554.373 kb on - strand, within H281DRAFT_03470 at 554.374 kb on + strand, within H281DRAFT_03470 at 554.375 kb on - strand, within H281DRAFT_03470 at 554.496 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.498 kb on + strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.499 kb on - strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.500 kb on + strand at 554.501 kb on - strand at 554.501 kb on - strand at 554.501 kb on - strand at 554.683 kb on + strand at 554.776 kb on + strand, within H281DRAFT_03471 at 554.777 kb on - strand, within H281DRAFT_03471 at 554.845 kb on + strand, within H281DRAFT_03471 at 554.846 kb on - strand, within H281DRAFT_03471 at 554.902 kb on + strand, within H281DRAFT_03471 at 554.903 kb on - strand, within H281DRAFT_03471 at 554.903 kb on - strand, within H281DRAFT_03471 at 555.011 kb on + strand, within H281DRAFT_03471 at 555.012 kb on - strand, within H281DRAFT_03471 at 555.220 kb on + strand, within H281DRAFT_03471 at 555.234 kb on + strand, within H281DRAFT_03471 at 555.289 kb on - strand, within H281DRAFT_03471 at 555.289 kb on - strand, within H281DRAFT_03471
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 551,965 + H281DRAFT_03468 0.76 +1.9 551,965 + H281DRAFT_03468 0.76 -0.2 551,966 - H281DRAFT_03468 0.77 +0.8 552,142 + -0.7 552,238 + H281DRAFT_03469 0.23 -0.0 552,238 + H281DRAFT_03469 0.23 +0.1 552,338 - H281DRAFT_03469 0.42 -0.1 552,338 - H281DRAFT_03469 0.42 +0.7 552,460 + H281DRAFT_03469 0.66 -0.5 552,460 + H281DRAFT_03469 0.66 +0.1 552,460 + H281DRAFT_03469 0.66 +2.1 552,460 + H281DRAFT_03469 0.66 -0.3 552,461 - H281DRAFT_03469 0.66 +0.5 552,461 - H281DRAFT_03469 0.66 +0.5 552,461 - H281DRAFT_03469 0.66 +0.7 552,461 - H281DRAFT_03469 0.66 -0.4 552,617 - -0.5 552,684 - +0.4 552,684 - -0.3 552,684 - +0.3 552,684 - -0.8 552,981 + -2.2 552,982 - +0.3 553,149 - H281DRAFT_03470 0.13 +0.6 553,499 + H281DRAFT_03470 0.34 +0.1 553,586 + H281DRAFT_03470 0.40 -1.0 553,586 + H281DRAFT_03470 0.40 -0.5 553,691 - H281DRAFT_03470 0.46 -0.1 554,007 - H281DRAFT_03470 0.66 +0.6 554,007 - H281DRAFT_03470 0.66 +0.2 554,010 + H281DRAFT_03470 0.66 -1.0 554,011 - H281DRAFT_03470 0.66 -0.0 554,372 + H281DRAFT_03470 0.88 +1.1 554,373 - H281DRAFT_03470 0.88 -1.0 554,374 + H281DRAFT_03470 0.88 -0.3 554,375 - H281DRAFT_03470 0.89 -0.2 554,496 + +0.0 554,498 + +0.2 554,498 + +0.4 554,498 + -0.6 554,498 + +0.7 554,498 + +2.5 554,498 + +0.2 554,498 + -0.2 554,499 - -0.1 554,499 - -0.5 554,499 - -0.0 554,499 - +0.7 554,499 - +0.5 554,500 + -0.0 554,500 + +2.5 554,500 + -0.1 554,500 + +0.2 554,500 + +0.5 554,501 - +0.2 554,501 - +0.2 554,501 - +0.3 554,683 + +0.1 554,776 + H281DRAFT_03471 0.13 +0.2 554,777 - H281DRAFT_03471 0.13 +1.2 554,845 + H281DRAFT_03471 0.17 -0.2 554,846 - H281DRAFT_03471 0.17 +0.1 554,902 + H281DRAFT_03471 0.21 -0.0 554,903 - H281DRAFT_03471 0.21 -0.4 554,903 - H281DRAFT_03471 0.21 -0.4 555,011 + H281DRAFT_03471 0.27 -0.2 555,012 - H281DRAFT_03471 0.27 -0.2 555,220 + H281DRAFT_03471 0.40 +0.2 555,234 + H281DRAFT_03471 0.41 +0.4 555,289 - H281DRAFT_03471 0.44 +1.6 555,289 - H281DRAFT_03471 0.44 -0.2
Or see this region's nucleotide sequence