Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03463 and H281DRAFT_03464 are separated by 87 nucleotides H281DRAFT_03464 and H281DRAFT_03465 are separated by 108 nucleotides H281DRAFT_03465 and H281DRAFT_03466 are separated by 67 nucleotides H281DRAFT_03466 and H281DRAFT_03467 are separated by 155 nucleotides
H281DRAFT_03463: H281DRAFT_03463 - hypothetical protein, at 548,726 to 549,076
_03463
H281DRAFT_03464: H281DRAFT_03464 - Organic hydroperoxide reductase OsmC/OhrA, at 549,164 to 549,640
_03464
H281DRAFT_03465: H281DRAFT_03465 - hypothetical protein, at 549,749 to 550,000
_03465
H281DRAFT_03466: H281DRAFT_03466 - transcriptional regulator, AsnC family, at 550,068 to 550,535
_03466
H281DRAFT_03467: H281DRAFT_03467 - Threonine/homoserine/homoserine lactone efflux protein, at 550,691 to 551,356
_03467
Position (kb) 549
550
551 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 548.788 kb on + strand, within H281DRAFT_03463 at 549.074 kb on + strand at 549.150 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.185 kb on + strand at 549.186 kb on - strand at 549.186 kb on - strand at 549.429 kb on - strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.575 kb on + strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.576 kb on - strand, within H281DRAFT_03464 at 549.577 kb on + strand, within H281DRAFT_03464 at 549.647 kb on + strand at 549.647 kb on + strand at 549.684 kb on + strand at 549.713 kb on - strand at 550.005 kb on + strand at 550.052 kb on + strand at 550.052 kb on + strand at 550.053 kb on - strand at 550.053 kb on - strand at 550.098 kb on + strand at 550.098 kb on + strand at 550.099 kb on - strand at 550.211 kb on + strand, within H281DRAFT_03466 at 550.211 kb on + strand, within H281DRAFT_03466 at 550.211 kb on + strand, within H281DRAFT_03466 at 550.211 kb on + strand, within H281DRAFT_03466 at 550.212 kb on - strand, within H281DRAFT_03466 at 550.212 kb on - strand, within H281DRAFT_03466 at 550.213 kb on + strand, within H281DRAFT_03466 at 550.214 kb on - strand, within H281DRAFT_03466 at 550.335 kb on + strand, within H281DRAFT_03466 at 550.388 kb on - strand, within H281DRAFT_03466 at 550.517 kb on + strand at 550.517 kb on + strand at 550.718 kb on + strand at 550.718 kb on + strand at 550.719 kb on - strand at 550.719 kb on - strand at 550.719 kb on - strand at 550.719 kb on - strand at 550.721 kb on - strand at 550.787 kb on - strand, within H281DRAFT_03467 at 550.907 kb on + strand, within H281DRAFT_03467 at 550.907 kb on + strand, within H281DRAFT_03467
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 548,788 + H281DRAFT_03463 0.18 +2.8 549,074 + +0.5 549,150 + -3.0 549,185 + +0.2 549,185 + +0.0 549,185 + -0.0 549,185 + +0.3 549,186 - +0.2 549,186 - +0.1 549,429 - H281DRAFT_03464 0.56 +0.9 549,575 + H281DRAFT_03464 0.86 -0.7 549,575 + H281DRAFT_03464 0.86 -0.7 549,575 + H281DRAFT_03464 0.86 +0.0 549,575 + H281DRAFT_03464 0.86 +0.1 549,575 + H281DRAFT_03464 0.86 +2.1 549,575 + H281DRAFT_03464 0.86 +0.4 549,575 + H281DRAFT_03464 0.86 +0.1 549,576 - H281DRAFT_03464 0.86 -1.0 549,576 - H281DRAFT_03464 0.86 +0.6 549,576 - H281DRAFT_03464 0.86 +0.3 549,576 - H281DRAFT_03464 0.86 -0.4 549,576 - H281DRAFT_03464 0.86 -1.3 549,577 + H281DRAFT_03464 0.87 -0.7 549,647 + +0.4 549,647 + +0.0 549,684 + -0.9 549,713 - -1.1 550,005 + +0.2 550,052 + -1.1 550,052 + -0.7 550,053 - -0.1 550,053 - -0.6 550,098 + +3.3 550,098 + -0.8 550,099 - +0.0 550,211 + H281DRAFT_03466 0.31 -0.7 550,211 + H281DRAFT_03466 0.31 +2.2 550,211 + H281DRAFT_03466 0.31 -0.5 550,211 + H281DRAFT_03466 0.31 +0.7 550,212 - H281DRAFT_03466 0.31 -0.2 550,212 - H281DRAFT_03466 0.31 -0.4 550,213 + H281DRAFT_03466 0.31 +0.9 550,214 - H281DRAFT_03466 0.31 -0.4 550,335 + H281DRAFT_03466 0.57 -0.3 550,388 - H281DRAFT_03466 0.68 +0.4 550,517 + +0.0 550,517 + +0.4 550,718 + +0.5 550,718 + +0.3 550,719 - +0.4 550,719 - +0.4 550,719 - +0.6 550,719 - -0.1 550,721 - -0.2 550,787 - H281DRAFT_03467 0.14 +0.3 550,907 + H281DRAFT_03467 0.32 -0.1 550,907 + H281DRAFT_03467 0.32 -0.2
Or see this region's nucleotide sequence