Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03408 and H281DRAFT_03409 are separated by 190 nucleotides H281DRAFT_03409 and H281DRAFT_03410 are separated by 124 nucleotides H281DRAFT_03410 and H281DRAFT_03411 are separated by 203 nucleotides H281DRAFT_03411 and H281DRAFT_03412 are separated by 99 nucleotides
H281DRAFT_03408: H281DRAFT_03408 - Transmembrane transcriptional regulator (anti-sigma factor RsiW), at 478,704 to 479,567
_03408
H281DRAFT_03409: H281DRAFT_03409 - Protein of unknown function (DUF3072), at 479,758 to 480,030
_03409
H281DRAFT_03410: H281DRAFT_03410 - Two-component sensor histidine kinase, contains HisKA and HATPase domains, at 480,155 to 481,546
_03410
H281DRAFT_03411: H281DRAFT_03411 - hypothetical protein, at 481,750 to 482,340
_03411
H281DRAFT_03412: H281DRAFT_03412 - Glycine-zipper containing OmpA-like membrane domain-containing protein, at 482,440 to 482,913
_03412
Position (kb) 480
481
482 Strain fitness (log2 ratio) -1
0
1 at 479.660 kb on - strand at 479.914 kb on + strand, within H281DRAFT_03409 at 480.052 kb on + strand at 480.052 kb on + strand at 480.052 kb on + strand at 480.075 kb on + strand at 480.156 kb on + strand at 480.156 kb on + strand at 480.156 kb on + strand at 480.348 kb on - strand, within H281DRAFT_03410 at 480.430 kb on + strand, within H281DRAFT_03410 at 480.430 kb on + strand, within H281DRAFT_03410 at 480.485 kb on - strand, within H281DRAFT_03410 at 480.594 kb on + strand, within H281DRAFT_03410 at 480.713 kb on - strand, within H281DRAFT_03410 at 480.717 kb on - strand, within H281DRAFT_03410 at 480.790 kb on - strand, within H281DRAFT_03410 at 481.095 kb on + strand, within H281DRAFT_03410 at 481.096 kb on - strand, within H281DRAFT_03410 at 481.855 kb on + strand, within H281DRAFT_03411 at 482.067 kb on - strand, within H281DRAFT_03411
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 479,660 - -0.4 479,914 + H281DRAFT_03409 0.57 +1.2 480,052 + -0.3 480,052 + -0.9 480,052 + -0.6 480,075 + +0.5 480,156 + +1.1 480,156 + +0.5 480,156 + +1.3 480,348 - H281DRAFT_03410 0.14 +1.0 480,430 + H281DRAFT_03410 0.20 +0.9 480,430 + H281DRAFT_03410 0.20 +1.0 480,485 - H281DRAFT_03410 0.24 -1.0 480,594 + H281DRAFT_03410 0.32 +0.0 480,713 - H281DRAFT_03410 0.40 +0.3 480,717 - H281DRAFT_03410 0.40 +0.3 480,790 - H281DRAFT_03410 0.46 -0.4 481,095 + H281DRAFT_03410 0.68 +1.2 481,096 - H281DRAFT_03410 0.68 -1.0 481,855 + H281DRAFT_03411 0.18 +0.4 482,067 - H281DRAFT_03411 0.54 -0.2
Or see this region's nucleotide sequence