Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03326 and H281DRAFT_03327 are separated by 214 nucleotides H281DRAFT_03327 and H281DRAFT_03328 are separated by 153 nucleotides H281DRAFT_03328 and H281DRAFT_03329 are separated by 199 nucleotides H281DRAFT_03329 and H281DRAFT_03330 are separated by 78 nucleotides
H281DRAFT_03326: H281DRAFT_03326 - PAS domain S-box-containing protein, at 384,857 to 387,025
_03326
H281DRAFT_03327: H281DRAFT_03327 - Protein of unknown function (DUF2795), at 387,240 to 387,461
_03327
H281DRAFT_03328: H281DRAFT_03328 - hypothetical protein, at 387,615 to 388,034
_03328
H281DRAFT_03329: H281DRAFT_03329 - hypothetical protein, at 388,234 to 388,491
_03329
H281DRAFT_03330: H281DRAFT_03330 - Uncharacterized conserved protein PhnB, glyoxalase superfamily, at 388,570 to 389,031
_03330
Position (kb) 387
388
389 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 387.129 kb on - strand at 387.129 kb on - strand at 387.138 kb on - strand at 387.539 kb on + strand at 387.540 kb on - strand at 387.788 kb on - strand, within H281DRAFT_03328 at 387.801 kb on + strand, within H281DRAFT_03328 at 387.802 kb on - strand, within H281DRAFT_03328 at 388.490 kb on - strand at 388.801 kb on - strand, within H281DRAFT_03330
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 387,129 - -0.2 387,129 - -1.4 387,138 - -0.2 387,539 + -0.6 387,540 - +0.3 387,788 - H281DRAFT_03328 0.41 +0.1 387,801 + H281DRAFT_03328 0.44 -3.0 387,802 - H281DRAFT_03328 0.45 -0.2 388,490 - +0.4 388,801 - H281DRAFT_03330 0.50 -0.7
Or see this region's nucleotide sequence