Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03327

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03326 and H281DRAFT_03327 are separated by 214 nucleotidesH281DRAFT_03327 and H281DRAFT_03328 are separated by 153 nucleotidesH281DRAFT_03328 and H281DRAFT_03329 are separated by 199 nucleotides H281DRAFT_03326: H281DRAFT_03326 - PAS domain S-box-containing protein, at 384,857 to 387,025 _03326 H281DRAFT_03327: H281DRAFT_03327 - Protein of unknown function (DUF2795), at 387,240 to 387,461 _03327 H281DRAFT_03328: H281DRAFT_03328 - hypothetical protein, at 387,615 to 388,034 _03328 H281DRAFT_03329: H281DRAFT_03329 - hypothetical protein, at 388,234 to 388,491 _03329 Position (kb) 387 388Strain fitness (log2 ratio) -3 -2 -1 0 1at 386.362 kb on - strand, within H281DRAFT_03326at 387.129 kb on - strandat 387.129 kb on - strandat 387.138 kb on - strandat 387.539 kb on + strandat 387.540 kb on - strandat 387.788 kb on - strand, within H281DRAFT_03328at 387.801 kb on + strand, within H281DRAFT_03328at 387.802 kb on - strand, within H281DRAFT_03328

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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386,362 - H281DRAFT_03326 0.69 +0.1
387,129 - -0.2
387,129 - -1.4
387,138 - -0.2
387,539 + -0.6
387,540 - +0.3
387,788 - H281DRAFT_03328 0.41 +0.1
387,801 + H281DRAFT_03328 0.44 -3.0
387,802 - H281DRAFT_03328 0.45 -0.2

Or see this region's nucleotide sequence