Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03323 and H281DRAFT_03324 overlap by 4 nucleotides H281DRAFT_03324 and H281DRAFT_03325 are separated by 57 nucleotides H281DRAFT_03325 and H281DRAFT_03326 are separated by 63 nucleotides H281DRAFT_03326 and H281DRAFT_03327 are separated by 214 nucleotides H281DRAFT_03327 and H281DRAFT_03328 are separated by 153 nucleotides
H281DRAFT_03323: H281DRAFT_03323 - hypothetical protein, at 383,361 to 383,996
_03323
H281DRAFT_03324: H281DRAFT_03324 - Low affinity Fe/Cu permease, at 383,993 to 384,520
_03324
H281DRAFT_03325: H281DRAFT_03325 - putative regulatory protein, FmdB family, at 384,578 to 384,793
_03325
H281DRAFT_03326: H281DRAFT_03326 - PAS domain S-box-containing protein, at 384,857 to 387,025
_03326
H281DRAFT_03327: H281DRAFT_03327 - Protein of unknown function (DUF2795), at 387,240 to 387,461
_03327
H281DRAFT_03328: H281DRAFT_03328 - hypothetical protein, at 387,615 to 388,034
_03328
Position (kb) 384
385
386
387
388 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 383.956 kb on + strand at 383.957 kb on - strand at 383.957 kb on - strand at 384.080 kb on + strand, within H281DRAFT_03324 at 384.102 kb on + strand, within H281DRAFT_03324 at 384.778 kb on - strand at 384.778 kb on - strand at 384.784 kb on - strand at 384.784 kb on - strand at 384.810 kb on - strand at 384.850 kb on - strand at 385.778 kb on + strand, within H281DRAFT_03326 at 386.026 kb on + strand, within H281DRAFT_03326 at 386.063 kb on + strand, within H281DRAFT_03326 at 386.205 kb on + strand, within H281DRAFT_03326 at 386.362 kb on - strand, within H281DRAFT_03326 at 387.129 kb on - strand at 387.129 kb on - strand at 387.138 kb on - strand at 387.539 kb on + strand at 387.540 kb on - strand at 387.788 kb on - strand, within H281DRAFT_03328 at 387.801 kb on + strand, within H281DRAFT_03328 at 387.802 kb on - strand, within H281DRAFT_03328
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 383,956 + +0.8 383,957 - -0.4 383,957 - +0.9 384,080 + H281DRAFT_03324 0.16 -1.4 384,102 + H281DRAFT_03324 0.21 +0.5 384,778 - -0.3 384,778 - -0.6 384,784 - +0.8 384,784 - +0.3 384,810 - +0.3 384,850 - -0.3 385,778 + H281DRAFT_03326 0.42 +0.7 386,026 + H281DRAFT_03326 0.54 +0.3 386,063 + H281DRAFT_03326 0.56 +1.0 386,205 + H281DRAFT_03326 0.62 +1.7 386,362 - H281DRAFT_03326 0.69 +0.1 387,129 - -0.2 387,129 - -1.4 387,138 - -0.2 387,539 + -0.6 387,540 - +0.3 387,788 - H281DRAFT_03328 0.41 +0.1 387,801 + H281DRAFT_03328 0.44 -3.0 387,802 - H281DRAFT_03328 0.45 -0.2
Or see this region's nucleotide sequence