Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03325

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03323 and H281DRAFT_03324 overlap by 4 nucleotidesH281DRAFT_03324 and H281DRAFT_03325 are separated by 57 nucleotidesH281DRAFT_03325 and H281DRAFT_03326 are separated by 63 nucleotides H281DRAFT_03323: H281DRAFT_03323 - hypothetical protein, at 383,361 to 383,996 _03323 H281DRAFT_03324: H281DRAFT_03324 - Low affinity Fe/Cu permease, at 383,993 to 384,520 _03324 H281DRAFT_03325: H281DRAFT_03325 - putative regulatory protein, FmdB family, at 384,578 to 384,793 _03325 H281DRAFT_03326: H281DRAFT_03326 - PAS domain S-box-containing protein, at 384,857 to 387,025 _03326 Position (kb) 384 385Strain fitness (log2 ratio) -1 0 1at 383.956 kb on + strandat 383.957 kb on - strandat 383.957 kb on - strandat 384.080 kb on + strand, within H281DRAFT_03324at 384.102 kb on + strand, within H281DRAFT_03324at 384.778 kb on - strandat 384.778 kb on - strandat 384.784 kb on - strandat 384.784 kb on - strandat 384.810 kb on - strandat 384.850 kb on - strandat 385.778 kb on + strand, within H281DRAFT_03326

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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383,956 + +0.8
383,957 - -0.4
383,957 - +0.9
384,080 + H281DRAFT_03324 0.16 -1.4
384,102 + H281DRAFT_03324 0.21 +0.5
384,778 - -0.3
384,778 - -0.6
384,784 - +0.8
384,784 - +0.3
384,810 - +0.3
384,850 - -0.3
385,778 + H281DRAFT_03326 0.42 +0.7

Or see this region's nucleotide sequence