Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_03098

Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_03097 and H281DRAFT_03098 are separated by 140 nucleotidesH281DRAFT_03098 and H281DRAFT_03099 are separated by 16 nucleotides H281DRAFT_03097: H281DRAFT_03097 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 130,579 to 132,015 _03097 H281DRAFT_03098: H281DRAFT_03098 - Uncharacterized conserved protein, at 132,156 to 132,701 _03098 H281DRAFT_03099: H281DRAFT_03099 - H+/Cl- antiporter ClcA, at 132,718 to 134,517 _03099 Position (kb) 132 133Strain fitness (log2 ratio) -2 -1 0 1 2 3at 131.165 kb on + strand, within H281DRAFT_03097at 131.720 kb on + strandat 131.766 kb on - strand, within H281DRAFT_03097at 131.833 kb on + strand, within H281DRAFT_03097at 131.885 kb on - strandat 131.948 kb on + strandat 131.950 kb on + strandat 132.021 kb on + strandat 132.021 kb on + strandat 132.568 kb on - strand, within H281DRAFT_03098at 133.230 kb on - strand, within H281DRAFT_03099at 133.310 kb on - strand, within H281DRAFT_03099at 133.527 kb on + strand, within H281DRAFT_03099

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Per-strain Table

Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C)
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131,165 + H281DRAFT_03097 0.41 -2.6
131,720 + +1.6
131,766 - H281DRAFT_03097 0.83 -0.4
131,833 + H281DRAFT_03097 0.87 +3.1
131,885 - -0.6
131,948 + +0.2
131,950 + -0.5
132,021 + +0.9
132,021 + +0.8
132,568 - H281DRAFT_03098 0.75 -1.4
133,230 - H281DRAFT_03099 0.28 -0.6
133,310 - H281DRAFT_03099 0.33 +0.0
133,527 + H281DRAFT_03099 0.45 -2.2

Or see this region's nucleotide sequence