Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03020 and H281DRAFT_03021 are separated by 29 nucleotides H281DRAFT_03021 and H281DRAFT_03022 are separated by 42 nucleotides H281DRAFT_03022 and H281DRAFT_03023 overlap by 19 nucleotides H281DRAFT_03023 and H281DRAFT_03024 are separated by 204 nucleotides
H281DRAFT_03020: H281DRAFT_03020 - uncharacterized protein, YigZ family, at 48,280 to 49,002
_03020
H281DRAFT_03021: H281DRAFT_03021 - Threonine/homoserine/homoserine lactone efflux protein, at 49,032 to 49,658
_03021
H281DRAFT_03022: H281DRAFT_03022 - 2-hydroxychromene-2-carboxylate isomerase, at 49,701 to 50,333
_03022
H281DRAFT_03023: H281DRAFT_03023 - Protein of unknown function (DUF2866), at 50,315 to 50,572
_03023
H281DRAFT_03024: H281DRAFT_03024 - peptidoglycan synthetase FtsI, at 50,777 to 52,513
_03024
Position (kb) 49
50
51 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 48.854 kb on + strand, within H281DRAFT_03020 at 48.854 kb on + strand, within H281DRAFT_03020 at 48.854 kb on + strand, within H281DRAFT_03020 at 48.962 kb on - strand at 48.962 kb on - strand at 48.977 kb on - strand at 49.073 kb on - strand at 49.403 kb on + strand, within H281DRAFT_03021 at 49.563 kb on - strand, within H281DRAFT_03021 at 49.563 kb on - strand, within H281DRAFT_03021 at 49.696 kb on + strand at 49.773 kb on + strand, within H281DRAFT_03022 at 49.773 kb on + strand, within H281DRAFT_03022 at 49.773 kb on + strand, within H281DRAFT_03022 at 49.774 kb on - strand, within H281DRAFT_03022 at 49.776 kb on - strand, within H281DRAFT_03022 at 49.776 kb on - strand, within H281DRAFT_03022 at 49.779 kb on + strand, within H281DRAFT_03022 at 50.390 kb on - strand, within H281DRAFT_03023 at 50.555 kb on + strand at 50.556 kb on - strand at 50.717 kb on + strand at 50.772 kb on + strand at 50.772 kb on + strand at 50.773 kb on - strand at 50.773 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 48,854 + H281DRAFT_03020 0.79 +0.7 48,854 + H281DRAFT_03020 0.79 +0.9 48,854 + H281DRAFT_03020 0.79 +1.1 48,962 - -0.1 48,962 - +0.1 48,977 - +0.7 49,073 - +0.7 49,403 + H281DRAFT_03021 0.59 -0.4 49,563 - H281DRAFT_03021 0.85 +0.1 49,563 - H281DRAFT_03021 0.85 -0.6 49,696 + -0.2 49,773 + H281DRAFT_03022 0.11 -0.8 49,773 + H281DRAFT_03022 0.11 +0.6 49,773 + H281DRAFT_03022 0.11 +0.8 49,774 - H281DRAFT_03022 0.12 -1.1 49,776 - H281DRAFT_03022 0.12 -0.0 49,776 - H281DRAFT_03022 0.12 -0.2 49,779 + H281DRAFT_03022 0.12 -0.4 50,390 - H281DRAFT_03023 0.29 +1.3 50,555 + -4.2 50,556 - +0.8 50,717 + +0.5 50,772 + +0.3 50,772 + -0.2 50,773 - -0.0 50,773 - +0.1
Or see this region's nucleotide sequence