Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03007 and H281DRAFT_03008 are separated by 24 nucleotides H281DRAFT_03008 and H281DRAFT_03009 are separated by 101 nucleotides
H281DRAFT_03007: H281DRAFT_03007 - acetolactate synthase-1/2/3 large subunit, at 32,245 to 34,008
_03007
H281DRAFT_03008: H281DRAFT_03008 - formyl-CoA transferase, at 34,033 to 35,280
_03008
H281DRAFT_03009: H281DRAFT_03009 - acetyl coenzyme A synthetase (ADP forming), alpha domain-containing protein, at 35,382 to 37,577
_03009
Position (kb) 34
35
36 Strain fitness (log2 ratio) -2
-1
0
1 at 33.125 kb on + strand, within H281DRAFT_03007 at 33.125 kb on + strand, within H281DRAFT_03007 at 33.183 kb on + strand, within H281DRAFT_03007 at 33.290 kb on + strand, within H281DRAFT_03007 at 33.290 kb on + strand, within H281DRAFT_03007 at 33.290 kb on + strand, within H281DRAFT_03007 at 33.343 kb on - strand, within H281DRAFT_03007 at 33.445 kb on + strand, within H281DRAFT_03007 at 33.481 kb on + strand, within H281DRAFT_03007 at 33.482 kb on - strand, within H281DRAFT_03007 at 33.482 kb on - strand, within H281DRAFT_03007 at 34.207 kb on + strand, within H281DRAFT_03008 at 34.252 kb on - strand, within H281DRAFT_03008 at 34.426 kb on + strand, within H281DRAFT_03008 at 34.427 kb on - strand, within H281DRAFT_03008 at 34.828 kb on + strand, within H281DRAFT_03008 at 34.950 kb on + strand, within H281DRAFT_03008 at 35.279 kb on - strand at 35.288 kb on - strand at 35.299 kb on - strand at 35.388 kb on + strand at 35.909 kb on + strand, within H281DRAFT_03009 at 36.137 kb on - strand, within H281DRAFT_03009
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 33,125 + H281DRAFT_03007 0.50 +1.5 33,125 + H281DRAFT_03007 0.50 +0.3 33,183 + H281DRAFT_03007 0.53 -0.7 33,290 + H281DRAFT_03007 0.59 -0.6 33,290 + H281DRAFT_03007 0.59 -1.7 33,290 + H281DRAFT_03007 0.59 -1.0 33,343 - H281DRAFT_03007 0.62 +0.3 33,445 + H281DRAFT_03007 0.68 +0.4 33,481 + H281DRAFT_03007 0.70 -0.1 33,482 - H281DRAFT_03007 0.70 +0.2 33,482 - H281DRAFT_03007 0.70 +0.4 34,207 + H281DRAFT_03008 0.14 -0.6 34,252 - H281DRAFT_03008 0.18 +0.7 34,426 + H281DRAFT_03008 0.31 -0.4 34,427 - H281DRAFT_03008 0.32 -0.8 34,828 + H281DRAFT_03008 0.64 +1.0 34,950 + H281DRAFT_03008 0.73 +0.7 35,279 - +0.0 35,288 - +1.6 35,299 - +1.0 35,388 + -0.2 35,909 + H281DRAFT_03009 0.24 -0.5 36,137 - H281DRAFT_03009 0.34 -2.0
Or see this region's nucleotide sequence