Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02998 and H281DRAFT_02999 are separated by 184 nucleotides H281DRAFT_02999 and H281DRAFT_03000 are separated by 506 nucleotides
H281DRAFT_02998: H281DRAFT_02998 - transcriptional regulator, LuxR family, at 20,883 to 21,878
_02998
H281DRAFT_02999: H281DRAFT_02999 - transcriptional regulator, AraC family, at 22,063 to 22,977
_02999
H281DRAFT_03000: H281DRAFT_03000 - hypothetical protein, at 23,484 to 23,909
_03000
Position (kb)
22
23 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 21.100 kb on - strand, within H281DRAFT_02998 at 21.421 kb on + strand, within H281DRAFT_02998 at 21.422 kb on - strand, within H281DRAFT_02998 at 21.464 kb on - strand, within H281DRAFT_02998 at 21.517 kb on + strand, within H281DRAFT_02998 at 21.518 kb on - strand, within H281DRAFT_02998 at 21.518 kb on - strand, within H281DRAFT_02998 at 21.799 kb on + strand at 21.799 kb on + strand at 21.800 kb on - strand at 21.800 kb on - strand at 21.800 kb on - strand at 21.924 kb on - strand at 21.930 kb on + strand at 21.930 kb on + strand at 21.931 kb on - strand at 21.934 kb on + strand at 21.934 kb on + strand at 21.935 kb on - strand at 22.109 kb on - strand at 22.175 kb on - strand, within H281DRAFT_02999 at 22.321 kb on + strand, within H281DRAFT_02999 at 22.322 kb on - strand at 22.391 kb on + strand, within H281DRAFT_02999 at 22.391 kb on + strand, within H281DRAFT_02999 at 22.395 kb on + strand, within H281DRAFT_02999 at 22.396 kb on - strand, within H281DRAFT_02999 at 22.396 kb on - strand, within H281DRAFT_02999 at 22.558 kb on + strand, within H281DRAFT_02999 at 22.558 kb on + strand, within H281DRAFT_02999 at 22.558 kb on + strand, within H281DRAFT_02999 at 22.607 kb on - strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.690 kb on + strand, within H281DRAFT_02999 at 22.691 kb on - strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.694 kb on + strand, within H281DRAFT_02999 at 22.751 kb on + strand, within H281DRAFT_02999 at 22.810 kb on + strand, within H281DRAFT_02999 at 22.922 kb on + strand at 22.940 kb on - strand at 23.021 kb on + strand at 23.022 kb on - strand at 23.160 kb on + strand at 23.160 kb on + strand at 23.160 kb on + strand at 23.175 kb on - strand at 23.262 kb on - strand at 23.365 kb on + strand at 23.365 kb on + strand at 23.366 kb on - strand at 23.366 kb on - strand at 23.366 kb on - strand at 23.475 kb on + strand at 23.479 kb on + strand at 23.480 kb on - strand at 23.523 kb on - strand at 23.764 kb on - strand, within H281DRAFT_03000 at 23.764 kb on - strand at 23.890 kb on + strand at 23.890 kb on + strand at 23.891 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 21,100 - H281DRAFT_02998 0.22 +0.6 21,421 + H281DRAFT_02998 0.54 +0.4 21,422 - H281DRAFT_02998 0.54 +1.2 21,464 - H281DRAFT_02998 0.58 +0.2 21,517 + H281DRAFT_02998 0.64 +0.3 21,518 - H281DRAFT_02998 0.64 -0.5 21,518 - H281DRAFT_02998 0.64 +0.1 21,799 + -0.8 21,799 + -0.4 21,800 - -0.1 21,800 - -0.3 21,800 - +0.1 21,924 - -0.6 21,930 + -0.4 21,930 + -0.3 21,931 - -1.0 21,934 + -0.3 21,934 + +0.4 21,935 - +0.1 22,109 - -0.8 22,175 - H281DRAFT_02999 0.12 +0.6 22,321 + H281DRAFT_02999 0.28 -2.5 22,322 - -0.6 22,391 + H281DRAFT_02999 0.36 -0.3 22,391 + H281DRAFT_02999 0.36 +0.2 22,395 + H281DRAFT_02999 0.36 +0.2 22,396 - H281DRAFT_02999 0.36 +1.3 22,396 - H281DRAFT_02999 0.36 +0.5 22,558 + H281DRAFT_02999 0.54 +1.0 22,558 + H281DRAFT_02999 0.54 -0.1 22,558 + H281DRAFT_02999 0.54 -0.3 22,607 - H281DRAFT_02999 0.59 +1.0 22,690 + H281DRAFT_02999 0.69 -0.9 22,690 + H281DRAFT_02999 0.69 -1.2 22,690 + H281DRAFT_02999 0.69 -0.6 22,690 + H281DRAFT_02999 0.69 -0.2 22,691 - H281DRAFT_02999 0.69 +1.5 22,694 + H281DRAFT_02999 0.69 +0.4 22,694 + H281DRAFT_02999 0.69 +1.4 22,694 + H281DRAFT_02999 0.69 -0.7 22,694 + H281DRAFT_02999 0.69 +0.0 22,751 + H281DRAFT_02999 0.75 -0.7 22,810 + H281DRAFT_02999 0.82 -0.8 22,922 + +1.7 22,940 - -1.6 23,021 + -2.3 23,022 - -1.8 23,160 + +0.1 23,160 + -0.5 23,160 + +0.2 23,175 - -0.4 23,262 - +0.3 23,365 + -0.7 23,365 + -0.8 23,366 - +0.3 23,366 - +1.8 23,366 - -0.6 23,475 + -1.4 23,479 + +1.8 23,480 - +1.0 23,523 - -0.2 23,764 - H281DRAFT_03000 0.66 +1.0 23,764 - +2.6 23,890 + -0.3 23,890 + +0.6 23,891 - -0.2
Or see this region's nucleotide sequence