Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02901 and H281DRAFT_02902 overlap by 4 nucleotides H281DRAFT_02902 and H281DRAFT_02903 are separated by 57 nucleotides H281DRAFT_02903 and H281DRAFT_02904 overlap by 14 nucleotides
H281DRAFT_02901: H281DRAFT_02901 - DNA excision repair protein ERCC-2, at 507,491 to 509,755
_02901
H281DRAFT_02902: H281DRAFT_02902 - VRR-NUC domain-containing protein, at 509,752 to 511,575
_02902
H281DRAFT_02903: H281DRAFT_02903 - L-lactate dehydrogenase complex protein LldG, at 511,633 to 512,220
_02903
H281DRAFT_02904: H281DRAFT_02904 - L-lactate dehydrogenase complex protein LldF, at 512,207 to 513,598
_02904
Position (kb) 509
510
511
512 Strain fitness (log2 ratio) -1
0
1
2 at 508.875 kb on + strand, within H281DRAFT_02901 at 508.876 kb on - strand, within H281DRAFT_02901 at 509.153 kb on - strand, within H281DRAFT_02901 at 509.355 kb on - strand, within H281DRAFT_02901 at 509.509 kb on - strand, within H281DRAFT_02901 at 509.748 kb on + strand at 509.886 kb on - strand at 509.890 kb on + strand at 510.224 kb on + strand, within H281DRAFT_02902 at 510.398 kb on + strand, within H281DRAFT_02902 at 510.398 kb on + strand, within H281DRAFT_02902 at 510.445 kb on - strand, within H281DRAFT_02902 at 510.619 kb on + strand, within H281DRAFT_02902 at 510.952 kb on + strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.157 kb on - strand, within H281DRAFT_02902 at 511.294 kb on + strand, within H281DRAFT_02902 at 511.529 kb on + strand at 511.532 kb on + strand at 511.533 kb on - strand at 511.602 kb on - strand at 511.839 kb on - strand, within H281DRAFT_02903 at 512.302 kb on + strand at 512.303 kb on - strand at 512.303 kb on - strand at 512.473 kb on + strand, within H281DRAFT_02904 at 512.474 kb on - strand, within H281DRAFT_02904 at 512.476 kb on - strand, within H281DRAFT_02904
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 508,875 + H281DRAFT_02901 0.61 +1.0 508,876 - H281DRAFT_02901 0.61 +0.8 509,153 - H281DRAFT_02901 0.73 +0.3 509,355 - H281DRAFT_02901 0.82 +1.0 509,509 - H281DRAFT_02901 0.89 -0.7 509,748 + +0.1 509,886 - +0.2 509,890 + -0.2 510,224 + H281DRAFT_02902 0.26 -0.7 510,398 + H281DRAFT_02902 0.35 +0.5 510,398 + H281DRAFT_02902 0.35 -0.3 510,445 - H281DRAFT_02902 0.38 -0.1 510,619 + H281DRAFT_02902 0.48 +0.7 510,952 + H281DRAFT_02902 0.66 -0.8 511,157 - H281DRAFT_02902 0.77 -0.2 511,157 - H281DRAFT_02902 0.77 -1.4 511,294 + H281DRAFT_02902 0.85 +1.2 511,529 + -0.4 511,532 + +0.4 511,533 - +1.9 511,602 - +2.7 511,839 - H281DRAFT_02903 0.35 -0.3 512,302 + +0.0 512,303 - +0.3 512,303 - -0.3 512,473 + H281DRAFT_02904 0.19 -0.1 512,474 - H281DRAFT_02904 0.19 -0.2 512,476 - H281DRAFT_02904 0.19 +1.3
Or see this region's nucleotide sequence