Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02615 and H281DRAFT_02616 are separated by 120 nucleotides H281DRAFT_02616 and H281DRAFT_02617 are separated by 68 nucleotides H281DRAFT_02617 and H281DRAFT_02618 overlap by 4 nucleotides H281DRAFT_02618 and H281DRAFT_02619 are separated by 105 nucleotides
H281DRAFT_02615: H281DRAFT_02615 - glutamine transport system substrate-binding protein, at 191,977 to 192,723
_02615
H281DRAFT_02616: H281DRAFT_02616 - hypothetical protein, at 192,844 to 193,047
_02616
H281DRAFT_02617: H281DRAFT_02617 - transcriptional regulator, RpiR family, at 193,116 to 193,976
_02617
H281DRAFT_02618: H281DRAFT_02618 - transcriptional regulator, LysR family, at 193,973 to 194,860
_02618
H281DRAFT_02619: H281DRAFT_02619 - N-acyl-D-amino-acid deacylase, at 194,966 to 196,402
_02619
Position (kb) 193
194 Strain fitness (log2 ratio) -1
0
1 at 192.170 kb on + strand, within H281DRAFT_02615 at 192.171 kb on - strand, within H281DRAFT_02615 at 192.171 kb on - strand, within H281DRAFT_02615 at 192.171 kb on - strand, within H281DRAFT_02615 at 192.173 kb on + strand, within H281DRAFT_02615 at 192.173 kb on + strand, within H281DRAFT_02615 at 192.401 kb on + strand, within H281DRAFT_02615 at 192.404 kb on + strand, within H281DRAFT_02615 at 192.404 kb on + strand, within H281DRAFT_02615 at 192.925 kb on + strand, within H281DRAFT_02616 at 192.985 kb on + strand, within H281DRAFT_02616 at 192.988 kb on + strand, within H281DRAFT_02616 at 193.078 kb on + strand at 193.079 kb on - strand at 193.079 kb on - strand at 193.079 kb on - strand at 193.297 kb on + strand, within H281DRAFT_02617 at 193.395 kb on - strand, within H281DRAFT_02617 at 193.775 kb on - strand, within H281DRAFT_02617 at 193.994 kb on + strand at 193.994 kb on + strand at 193.995 kb on - strand at 193.995 kb on - strand at 194.199 kb on + strand, within H281DRAFT_02618 at 194.200 kb on - strand, within H281DRAFT_02618 at 194.505 kb on + strand, within H281DRAFT_02618 at 194.582 kb on - strand, within H281DRAFT_02618 at 194.715 kb on - strand, within H281DRAFT_02618
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 192,170 + H281DRAFT_02615 0.26 +0.5 192,171 - H281DRAFT_02615 0.26 +0.9 192,171 - H281DRAFT_02615 0.26 -0.3 192,171 - H281DRAFT_02615 0.26 -0.4 192,173 + H281DRAFT_02615 0.26 -0.6 192,173 + H281DRAFT_02615 0.26 -0.7 192,401 + H281DRAFT_02615 0.57 +1.1 192,404 + H281DRAFT_02615 0.57 -0.1 192,404 + H281DRAFT_02615 0.57 +0.1 192,925 + H281DRAFT_02616 0.40 +1.1 192,985 + H281DRAFT_02616 0.69 -0.2 192,988 + H281DRAFT_02616 0.71 +0.5 193,078 + -0.8 193,079 - -0.8 193,079 - -0.1 193,079 - +1.0 193,297 + H281DRAFT_02617 0.21 +0.4 193,395 - H281DRAFT_02617 0.32 +0.6 193,775 - H281DRAFT_02617 0.77 +0.3 193,994 + +1.1 193,994 + -0.2 193,995 - -0.6 193,995 - +1.4 194,199 + H281DRAFT_02618 0.25 +1.4 194,200 - H281DRAFT_02618 0.26 -0.6 194,505 + H281DRAFT_02618 0.60 -0.5 194,582 - H281DRAFT_02618 0.69 +0.5 194,715 - H281DRAFT_02618 0.84 -0.4
Or see this region's nucleotide sequence