Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02499 and H281DRAFT_02500 are separated by 141 nucleotides H281DRAFT_02500 and H281DRAFT_02501 are separated by 253 nucleotides H281DRAFT_02501 and H281DRAFT_02502 are separated by 244 nucleotides
H281DRAFT_02499: H281DRAFT_02499 - Acyl-CoA reductase, at 76,194 to 77,705
_02499
H281DRAFT_02500: H281DRAFT_02500 - hypothetical protein, at 77,847 to 78,083
_02500
H281DRAFT_02501: H281DRAFT_02501 - hypothetical protein, at 78,337 to 79,449
_02501
H281DRAFT_02502: H281DRAFT_02502 - transcriptional regulator, LysR family, at 79,694 to 80,626
_02502
Position (kb) 78
79
80 Strain fitness (log2 ratio) -1
0
1 at 77.429 kb on + strand, within H281DRAFT_02499 at 77.429 kb on + strand, within H281DRAFT_02499 at 77.430 kb on - strand, within H281DRAFT_02499 at 77.704 kb on - strand at 77.848 kb on + strand at 78.057 kb on + strand, within H281DRAFT_02500 at 78.100 kb on - strand at 78.159 kb on + strand at 78.287 kb on + strand at 78.288 kb on - strand at 78.459 kb on + strand, within H281DRAFT_02501 at 78.530 kb on - strand, within H281DRAFT_02501 at 78.585 kb on + strand, within H281DRAFT_02501 at 78.614 kb on - strand, within H281DRAFT_02501 at 78.864 kb on + strand, within H281DRAFT_02501 at 78.922 kb on + strand, within H281DRAFT_02501 at 79.247 kb on - strand, within H281DRAFT_02501 at 79.336 kb on - strand, within H281DRAFT_02501 at 79.379 kb on - strand at 79.447 kb on + strand at 79.447 kb on + strand at 79.448 kb on - strand at 79.448 kb on - strand at 79.650 kb on - strand at 79.722 kb on - strand at 79.890 kb on - strand, within H281DRAFT_02502 at 80.204 kb on + strand, within H281DRAFT_02502 at 80.205 kb on - strand, within H281DRAFT_02502 at 80.245 kb on - strand, within H281DRAFT_02502
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 77,429 + H281DRAFT_02499 0.82 -0.6 77,429 + H281DRAFT_02499 0.82 +0.6 77,430 - H281DRAFT_02499 0.82 +0.3 77,704 - +0.2 77,848 + +0.5 78,057 + H281DRAFT_02500 0.89 +1.4 78,100 - -0.0 78,159 + -0.0 78,287 + -0.2 78,288 - -0.2 78,459 + H281DRAFT_02501 0.11 -0.7 78,530 - H281DRAFT_02501 0.17 +0.3 78,585 + H281DRAFT_02501 0.22 -0.5 78,614 - H281DRAFT_02501 0.25 -1.3 78,864 + H281DRAFT_02501 0.47 +0.6 78,922 + H281DRAFT_02501 0.53 -0.4 79,247 - H281DRAFT_02501 0.82 +1.5 79,336 - H281DRAFT_02501 0.90 +0.2 79,379 - -1.0 79,447 + +0.7 79,447 + +0.8 79,448 - -1.1 79,448 - -0.7 79,650 - +0.8 79,722 - +0.4 79,890 - H281DRAFT_02502 0.21 +0.6 80,204 + H281DRAFT_02502 0.55 +0.7 80,205 - H281DRAFT_02502 0.55 -0.0 80,245 - H281DRAFT_02502 0.59 -1.6
Or see this region's nucleotide sequence