Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02459 and H281DRAFT_02460 are separated by 64 nucleotides H281DRAFT_02460 and H281DRAFT_02461 are separated by 93 nucleotides H281DRAFT_02461 and H281DRAFT_02462 are separated by 93 nucleotides
H281DRAFT_02459: H281DRAFT_02459 - sarcosine oxidase subunit gamma, at 26,432 to 27,088
_02459
H281DRAFT_02460: H281DRAFT_02460 - hypothetical protein, at 27,153 to 27,416
_02460
H281DRAFT_02461: H281DRAFT_02461 - MFS transporter, putative metabolite:H+ symporter, at 27,510 to 29,027
_02461
H281DRAFT_02462: H281DRAFT_02462 - beta-lactamase class C, at 29,121 to 30,302
_02462
Position (kb) 27
28
29
30 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 26.854 kb on + strand, within H281DRAFT_02459 at 26.855 kb on - strand, within H281DRAFT_02459 at 27.096 kb on - strand at 27.282 kb on + strand, within H281DRAFT_02460 at 27.286 kb on + strand, within H281DRAFT_02460 at 27.287 kb on - strand, within H281DRAFT_02460 at 27.333 kb on + strand, within H281DRAFT_02460 at 27.334 kb on - strand, within H281DRAFT_02460 at 27.415 kb on - strand at 27.516 kb on + strand at 27.525 kb on + strand at 27.526 kb on - strand at 27.538 kb on + strand at 27.539 kb on - strand at 27.551 kb on - strand at 27.925 kb on - strand, within H281DRAFT_02461 at 27.925 kb on - strand, within H281DRAFT_02461 at 27.967 kb on - strand, within H281DRAFT_02461 at 28.120 kb on - strand, within H281DRAFT_02461 at 28.120 kb on - strand, within H281DRAFT_02461 at 28.379 kb on - strand, within H281DRAFT_02461 at 28.392 kb on + strand, within H281DRAFT_02461 at 28.393 kb on - strand, within H281DRAFT_02461 at 28.450 kb on - strand, within H281DRAFT_02461 at 28.518 kb on + strand, within H281DRAFT_02461 at 28.639 kb on - strand, within H281DRAFT_02461 at 28.740 kb on + strand, within H281DRAFT_02461 at 28.740 kb on + strand, within H281DRAFT_02461 at 28.740 kb on + strand, within H281DRAFT_02461 at 28.741 kb on - strand, within H281DRAFT_02461 at 28.746 kb on + strand, within H281DRAFT_02461 at 28.747 kb on - strand, within H281DRAFT_02461 at 28.836 kb on + strand, within H281DRAFT_02461 at 28.837 kb on - strand, within H281DRAFT_02461 at 28.837 kb on - strand, within H281DRAFT_02461 at 28.930 kb on + strand at 29.122 kb on + strand at 29.245 kb on + strand, within H281DRAFT_02462 at 29.399 kb on - strand, within H281DRAFT_02462 at 29.555 kb on - strand, within H281DRAFT_02462 at 29.610 kb on - strand, within H281DRAFT_02462 at 29.610 kb on - strand, within H281DRAFT_02462 at 29.610 kb on - strand, within H281DRAFT_02462 at 29.654 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.656 kb on + strand, within H281DRAFT_02462 at 29.657 kb on - strand, within H281DRAFT_02462 at 29.771 kb on - strand, within H281DRAFT_02462 at 29.795 kb on - strand, within H281DRAFT_02462 at 29.818 kb on + strand, within H281DRAFT_02462 at 29.944 kb on + strand, within H281DRAFT_02462 at 29.945 kb on - strand, within H281DRAFT_02462 at 29.945 kb on - strand, within H281DRAFT_02462
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 26,854 + H281DRAFT_02459 0.64 -1.4 26,855 - H281DRAFT_02459 0.64 -0.0 27,096 - +1.8 27,282 + H281DRAFT_02460 0.49 -0.2 27,286 + H281DRAFT_02460 0.50 +0.2 27,287 - H281DRAFT_02460 0.51 -0.2 27,333 + H281DRAFT_02460 0.68 -0.9 27,334 - H281DRAFT_02460 0.69 -0.3 27,415 - +0.8 27,516 + +0.1 27,525 + +0.1 27,526 - +0.2 27,538 + +0.2 27,539 - +0.3 27,551 - +0.3 27,925 - H281DRAFT_02461 0.27 -0.9 27,925 - H281DRAFT_02461 0.27 +0.3 27,967 - H281DRAFT_02461 0.30 -0.8 28,120 - H281DRAFT_02461 0.40 -1.2 28,120 - H281DRAFT_02461 0.40 +0.5 28,379 - H281DRAFT_02461 0.57 -0.2 28,392 + H281DRAFT_02461 0.58 +0.2 28,393 - H281DRAFT_02461 0.58 +0.9 28,450 - H281DRAFT_02461 0.62 +0.2 28,518 + H281DRAFT_02461 0.66 +0.8 28,639 - H281DRAFT_02461 0.74 +0.4 28,740 + H281DRAFT_02461 0.81 -0.2 28,740 + H281DRAFT_02461 0.81 +1.3 28,740 + H281DRAFT_02461 0.81 -0.3 28,741 - H281DRAFT_02461 0.81 +2.5 28,746 + H281DRAFT_02461 0.81 -0.2 28,747 - H281DRAFT_02461 0.81 +0.6 28,836 + H281DRAFT_02461 0.87 -0.1 28,837 - H281DRAFT_02461 0.87 +0.2 28,837 - H281DRAFT_02461 0.87 -0.2 28,930 + +0.3 29,122 + -0.7 29,245 + H281DRAFT_02462 0.10 +3.1 29,399 - H281DRAFT_02462 0.24 -0.4 29,555 - H281DRAFT_02462 0.37 +0.5 29,610 - H281DRAFT_02462 0.41 +1.2 29,610 - H281DRAFT_02462 0.41 -0.1 29,610 - H281DRAFT_02462 0.41 +0.2 29,654 + H281DRAFT_02462 0.45 -0.3 29,656 + H281DRAFT_02462 0.45 -0.0 29,656 + H281DRAFT_02462 0.45 +0.8 29,656 + H281DRAFT_02462 0.45 +0.8 29,656 + H281DRAFT_02462 0.45 +0.8 29,656 + H281DRAFT_02462 0.45 +0.5 29,657 - H281DRAFT_02462 0.45 -2.6 29,771 - H281DRAFT_02462 0.55 -0.2 29,795 - H281DRAFT_02462 0.57 -1.2 29,818 + H281DRAFT_02462 0.59 -0.3 29,944 + H281DRAFT_02462 0.70 -0.3 29,945 - H281DRAFT_02462 0.70 -0.7 29,945 - H281DRAFT_02462 0.70 +0.1
Or see this region's nucleotide sequence