Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02372 and H281DRAFT_02373 are separated by 154 nucleotides H281DRAFT_02373 and H281DRAFT_02374 are separated by 101 nucleotides
H281DRAFT_02372: H281DRAFT_02372 - transcriptional regulator, LysR family, at 532,799 to 533,698
_02372
H281DRAFT_02373: H281DRAFT_02373 - methylmalonate-semialdehyde dehydrogenase [acylating], at 533,853 to 535,391
_02373
H281DRAFT_02374: H281DRAFT_02374 - choline dehydrogenase, at 535,493 to 537,205
_02374
Position (kb) 533
534
535
536 Strain fitness (log2 ratio) -2
-1
0
1
2 at 532.859 kb on - strand at 533.262 kb on + strand, within H281DRAFT_02372 at 533.263 kb on - strand, within H281DRAFT_02372 at 533.706 kb on + strand at 533.706 kb on + strand at 533.707 kb on - strand at 533.710 kb on - strand at 533.710 kb on - strand at 533.719 kb on + strand at 533.720 kb on - strand at 533.738 kb on - strand at 533.738 kb on - strand at 533.738 kb on - strand at 533.866 kb on - strand at 533.866 kb on - strand at 534.322 kb on + strand, within H281DRAFT_02373 at 534.323 kb on - strand, within H281DRAFT_02373 at 534.336 kb on - strand, within H281DRAFT_02373 at 534.388 kb on + strand, within H281DRAFT_02373 at 534.389 kb on - strand, within H281DRAFT_02373 at 534.460 kb on + strand, within H281DRAFT_02373 at 534.460 kb on + strand, within H281DRAFT_02373 at 534.512 kb on + strand, within H281DRAFT_02373 at 534.773 kb on + strand, within H281DRAFT_02373 at 534.774 kb on - strand, within H281DRAFT_02373 at 535.012 kb on + strand, within H281DRAFT_02373 at 535.012 kb on + strand, within H281DRAFT_02373 at 535.012 kb on + strand, within H281DRAFT_02373 at 535.013 kb on - strand, within H281DRAFT_02373 at 535.023 kb on - strand, within H281DRAFT_02373 at 535.023 kb on - strand, within H281DRAFT_02373 at 535.033 kb on - strand, within H281DRAFT_02373 at 535.060 kb on + strand, within H281DRAFT_02373 at 535.061 kb on - strand, within H281DRAFT_02373 at 535.308 kb on + strand at 535.308 kb on + strand at 535.319 kb on + strand at 535.319 kb on + strand at 535.320 kb on - strand at 535.349 kb on + strand at 535.390 kb on - strand at 535.390 kb on - strand at 535.390 kb on - strand at 535.457 kb on + strand at 535.462 kb on - strand at 535.653 kb on - strand at 535.718 kb on + strand, within H281DRAFT_02374 at 535.720 kb on + strand, within H281DRAFT_02374 at 535.721 kb on - strand, within H281DRAFT_02374 at 535.814 kb on + strand, within H281DRAFT_02374 at 535.814 kb on + strand, within H281DRAFT_02374 at 535.814 kb on + strand, within H281DRAFT_02374 at 535.815 kb on - strand, within H281DRAFT_02374 at 535.815 kb on - strand, within H281DRAFT_02374 at 535.815 kb on - strand, within H281DRAFT_02374 at 535.816 kb on + strand, within H281DRAFT_02374 at 535.816 kb on + strand, within H281DRAFT_02374 at 535.817 kb on - strand, within H281DRAFT_02374 at 535.838 kb on + strand, within H281DRAFT_02374 at 536.252 kb on + strand, within H281DRAFT_02374 at 536.336 kb on - strand, within H281DRAFT_02374 at 536.370 kb on + strand, within H281DRAFT_02374
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 532,859 - +0.8 533,262 + H281DRAFT_02372 0.51 -1.0 533,263 - H281DRAFT_02372 0.52 -0.9 533,706 + -0.1 533,706 + +0.2 533,707 - +1.2 533,710 - -1.0 533,710 - +0.1 533,719 + +0.1 533,720 - +0.1 533,738 - -0.9 533,738 - -0.1 533,738 - +1.3 533,866 - -0.0 533,866 - +1.0 534,322 + H281DRAFT_02373 0.30 -0.5 534,323 - H281DRAFT_02373 0.31 +1.2 534,336 - H281DRAFT_02373 0.31 +0.1 534,388 + H281DRAFT_02373 0.35 -1.3 534,389 - H281DRAFT_02373 0.35 -0.5 534,460 + H281DRAFT_02373 0.39 -0.0 534,460 + H281DRAFT_02373 0.39 -0.6 534,512 + H281DRAFT_02373 0.43 +0.0 534,773 + H281DRAFT_02373 0.60 -0.3 534,774 - H281DRAFT_02373 0.60 -0.3 535,012 + H281DRAFT_02373 0.75 -0.3 535,012 + H281DRAFT_02373 0.75 -0.1 535,012 + H281DRAFT_02373 0.75 +0.7 535,013 - H281DRAFT_02373 0.75 +0.0 535,023 - H281DRAFT_02373 0.76 +1.9 535,023 - H281DRAFT_02373 0.76 -1.1 535,033 - H281DRAFT_02373 0.77 +0.0 535,060 + H281DRAFT_02373 0.78 -0.0 535,061 - H281DRAFT_02373 0.78 -0.7 535,308 + +0.9 535,308 + -0.7 535,319 + +0.4 535,319 + +0.5 535,320 - -1.3 535,349 + +0.5 535,390 - -2.2 535,390 - -0.5 535,390 - +0.1 535,457 + -0.4 535,462 - -1.3 535,653 - -1.1 535,718 + H281DRAFT_02374 0.13 +1.1 535,720 + H281DRAFT_02374 0.13 -0.6 535,721 - H281DRAFT_02374 0.13 +0.0 535,814 + H281DRAFT_02374 0.19 -0.8 535,814 + H281DRAFT_02374 0.19 +0.5 535,814 + H281DRAFT_02374 0.19 +1.5 535,815 - H281DRAFT_02374 0.19 -0.1 535,815 - H281DRAFT_02374 0.19 -0.7 535,815 - H281DRAFT_02374 0.19 -0.7 535,816 + H281DRAFT_02374 0.19 +0.5 535,816 + H281DRAFT_02374 0.19 -0.4 535,817 - H281DRAFT_02374 0.19 -0.6 535,838 + H281DRAFT_02374 0.20 +0.8 536,252 + H281DRAFT_02374 0.44 -0.4 536,336 - H281DRAFT_02374 0.49 +1.6 536,370 + H281DRAFT_02374 0.51 -0.4
Or see this region's nucleotide sequence