Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02133 and H281DRAFT_02134 are separated by 410 nucleotides H281DRAFT_02134 and H281DRAFT_02135 are separated by 192 nucleotides H281DRAFT_02135 and H281DRAFT_02136 are separated by 126 nucleotides
H281DRAFT_02133: H281DRAFT_02133 - hypothetical protein, at 270,471 to 272,057
_02133
H281DRAFT_02134: H281DRAFT_02134 - hypothetical protein, at 272,468 to 273,343
_02134
H281DRAFT_02135: H281DRAFT_02135 - Protein of unknown function (DUF3892), at 273,536 to 273,835
_02135
H281DRAFT_02136: H281DRAFT_02136 - hypothetical protein, at 273,962 to 274,549
_02136
Position (kb) 272
273
274 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 271.509 kb on + strand, within H281DRAFT_02133 at 271.510 kb on - strand, within H281DRAFT_02133 at 271.557 kb on + strand, within H281DRAFT_02133 at 271.558 kb on - strand, within H281DRAFT_02133 at 271.558 kb on - strand, within H281DRAFT_02133 at 271.569 kb on + strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.609 kb on - strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.661 kb on + strand, within H281DRAFT_02133 at 271.662 kb on - strand, within H281DRAFT_02133 at 271.662 kb on - strand, within H281DRAFT_02133 at 271.662 kb on - strand, within H281DRAFT_02133 at 271.672 kb on - strand, within H281DRAFT_02133 at 271.691 kb on + strand, within H281DRAFT_02133 at 271.715 kb on + strand, within H281DRAFT_02133 at 271.715 kb on + strand, within H281DRAFT_02133 at 271.715 kb on + strand, within H281DRAFT_02133 at 271.716 kb on - strand, within H281DRAFT_02133 at 271.716 kb on - strand, within H281DRAFT_02133 at 271.716 kb on - strand, within H281DRAFT_02133 at 271.756 kb on + strand, within H281DRAFT_02133 at 271.756 kb on + strand, within H281DRAFT_02133 at 271.757 kb on - strand, within H281DRAFT_02133 at 271.757 kb on - strand, within H281DRAFT_02133 at 271.757 kb on - strand at 271.781 kb on + strand, within H281DRAFT_02133 at 271.781 kb on + strand, within H281DRAFT_02133 at 271.782 kb on - strand, within H281DRAFT_02133 at 271.782 kb on - strand, within H281DRAFT_02133 at 271.782 kb on - strand, within H281DRAFT_02133 at 271.784 kb on + strand, within H281DRAFT_02133 at 271.784 kb on + strand, within H281DRAFT_02133 at 271.784 kb on + strand, within H281DRAFT_02133 at 271.785 kb on - strand, within H281DRAFT_02133 at 271.789 kb on + strand, within H281DRAFT_02133 at 271.790 kb on - strand, within H281DRAFT_02133 at 271.844 kb on - strand, within H281DRAFT_02133 at 271.963 kb on + strand at 272.004 kb on + strand at 272.004 kb on + strand at 272.005 kb on - strand at 272.078 kb on - strand at 272.078 kb on - strand at 272.082 kb on + strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.083 kb on - strand at 272.087 kb on + strand at 272.088 kb on - strand at 272.100 kb on + strand at 272.100 kb on + strand at 272.101 kb on - strand at 272.136 kb on + strand at 272.136 kb on + strand at 272.137 kb on - strand at 272.142 kb on + strand at 272.142 kb on + strand at 272.142 kb on + strand at 272.142 kb on + strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.143 kb on - strand at 272.198 kb on + strand at 272.198 kb on + strand at 272.199 kb on - strand at 272.199 kb on - strand at 272.205 kb on - strand at 272.215 kb on + strand at 272.215 kb on + strand at 272.216 kb on - strand at 272.216 kb on - strand at 272.218 kb on - strand at 272.396 kb on + strand at 272.396 kb on + strand at 272.396 kb on + strand at 272.396 kb on + strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.397 kb on - strand at 272.398 kb on + strand at 272.398 kb on + strand at 272.398 kb on + strand at 272.398 kb on + strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.399 kb on - strand at 272.492 kb on - strand at 272.492 kb on - strand at 272.492 kb on - strand at 272.501 kb on - strand at 272.600 kb on + strand, within H281DRAFT_02134 at 272.638 kb on - strand at 272.688 kb on + strand, within H281DRAFT_02134 at 272.688 kb on + strand, within H281DRAFT_02134 at 272.691 kb on + strand, within H281DRAFT_02134 at 272.692 kb on - strand, within H281DRAFT_02134 at 272.692 kb on - strand, within H281DRAFT_02134 at 272.698 kb on + strand, within H281DRAFT_02134 at 272.698 kb on + strand, within H281DRAFT_02134 at 272.701 kb on - strand, within H281DRAFT_02134 at 272.745 kb on + strand, within H281DRAFT_02134 at 272.754 kb on + strand, within H281DRAFT_02134 at 272.810 kb on + strand, within H281DRAFT_02134 at 272.853 kb on + strand, within H281DRAFT_02134 at 272.853 kb on + strand, within H281DRAFT_02134 at 272.854 kb on - strand, within H281DRAFT_02134 at 272.854 kb on - strand, within H281DRAFT_02134 at 272.903 kb on - strand, within H281DRAFT_02134 at 272.992 kb on - strand, within H281DRAFT_02134 at 273.089 kb on + strand, within H281DRAFT_02134 at 273.109 kb on + strand, within H281DRAFT_02134 at 273.110 kb on - strand, within H281DRAFT_02134 at 273.112 kb on - strand, within H281DRAFT_02134 at 273.134 kb on - strand, within H281DRAFT_02134 at 273.134 kb on - strand, within H281DRAFT_02134 at 273.209 kb on + strand, within H281DRAFT_02134 at 273.237 kb on - strand, within H281DRAFT_02134 at 273.252 kb on + strand, within H281DRAFT_02134 at 273.252 kb on + strand, within H281DRAFT_02134 at 273.253 kb on - strand, within H281DRAFT_02134 at 273.322 kb on + strand at 273.344 kb on - strand at 273.357 kb on + strand at 273.357 kb on + strand at 273.357 kb on + strand at 273.357 kb on + strand at 273.358 kb on - strand at 273.358 kb on - strand at 273.430 kb on + strand at 273.453 kb on - strand at 273.453 kb on - strand at 273.453 kb on - strand at 273.459 kb on + strand at 273.459 kb on + strand at 273.503 kb on + strand at 273.619 kb on - strand, within H281DRAFT_02135 at 273.619 kb on - strand, within H281DRAFT_02135 at 273.670 kb on + strand, within H281DRAFT_02135 at 273.687 kb on + strand, within H281DRAFT_02135 at 273.687 kb on + strand, within H281DRAFT_02135 at 273.688 kb on - strand, within H281DRAFT_02135 at 273.736 kb on + strand, within H281DRAFT_02135 at 273.736 kb on + strand, within H281DRAFT_02135 at 273.757 kb on + strand, within H281DRAFT_02135 at 273.805 kb on + strand, within H281DRAFT_02135 at 273.806 kb on - strand at 273.806 kb on - strand at 273.806 kb on - strand at 273.817 kb on + strand at 273.817 kb on + strand at 273.818 kb on - strand at 273.818 kb on - strand at 273.818 kb on - strand at 273.818 kb on - strand at 273.838 kb on + strand at 273.838 kb on + strand at 273.905 kb on + strand at 273.905 kb on + strand at 273.905 kb on + strand at 273.906 kb on - strand at 273.906 kb on - strand at 273.972 kb on + strand at 273.976 kb on - strand at 274.129 kb on + strand at 274.129 kb on + strand, within H281DRAFT_02136 at 274.129 kb on + strand, within H281DRAFT_02136 at 274.190 kb on + strand, within H281DRAFT_02136
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 271,509 + H281DRAFT_02133 0.65 -0.3 271,510 - H281DRAFT_02133 0.65 -0.0 271,557 + H281DRAFT_02133 0.68 +0.8 271,558 - H281DRAFT_02133 0.68 +0.1 271,558 - H281DRAFT_02133 0.68 -0.5 271,569 + H281DRAFT_02133 0.69 -0.2 271,609 - H281DRAFT_02133 0.72 +0.4 271,609 - H281DRAFT_02133 0.72 -0.1 271,609 - H281DRAFT_02133 0.72 +0.7 271,609 - H281DRAFT_02133 0.72 +0.6 271,609 - H281DRAFT_02133 0.72 +0.1 271,661 + H281DRAFT_02133 0.75 -0.3 271,661 + H281DRAFT_02133 0.75 -0.8 271,661 + H281DRAFT_02133 0.75 +0.1 271,661 + H281DRAFT_02133 0.75 +0.5 271,662 - H281DRAFT_02133 0.75 +0.8 271,662 - H281DRAFT_02133 0.75 +0.0 271,662 - H281DRAFT_02133 0.75 -0.1 271,672 - H281DRAFT_02133 0.76 +0.8 271,691 + H281DRAFT_02133 0.77 +0.1 271,715 + H281DRAFT_02133 0.78 -0.2 271,715 + H281DRAFT_02133 0.78 +0.6 271,715 + H281DRAFT_02133 0.78 +1.6 271,716 - H281DRAFT_02133 0.78 +0.9 271,716 - H281DRAFT_02133 0.78 -0.1 271,716 - H281DRAFT_02133 0.78 +0.4 271,756 + H281DRAFT_02133 0.81 -0.9 271,756 + H281DRAFT_02133 0.81 -0.4 271,757 - H281DRAFT_02133 0.81 -0.2 271,757 - H281DRAFT_02133 0.81 +2.1 271,757 - +0.2 271,781 + H281DRAFT_02133 0.83 -0.2 271,781 + H281DRAFT_02133 0.83 +1.0 271,782 - H281DRAFT_02133 0.83 -0.1 271,782 - H281DRAFT_02133 0.83 -0.6 271,782 - H281DRAFT_02133 0.83 +0.2 271,784 + H281DRAFT_02133 0.83 +0.2 271,784 + H281DRAFT_02133 0.83 -1.1 271,784 + H281DRAFT_02133 0.83 +1.2 271,785 - H281DRAFT_02133 0.83 +0.2 271,789 + H281DRAFT_02133 0.83 -0.3 271,790 - H281DRAFT_02133 0.83 -0.1 271,844 - H281DRAFT_02133 0.87 -1.1 271,963 + +0.2 272,004 + -0.7 272,004 + -1.1 272,005 - -0.2 272,078 - +1.2 272,078 - +0.7 272,082 + -1.0 272,083 - +0.8 272,083 - +1.8 272,083 - +0.7 272,083 - +0.4 272,083 - -0.8 272,087 + +0.4 272,088 - -0.1 272,100 + -0.9 272,100 + +0.3 272,101 - -1.0 272,136 + +0.1 272,136 + -0.3 272,137 - +1.0 272,142 + -1.3 272,142 + +1.2 272,142 + +0.2 272,142 + +1.1 272,143 - -0.8 272,143 - +0.0 272,143 - +0.1 272,143 - +1.1 272,143 - -0.5 272,198 + +0.5 272,198 + -0.3 272,199 - -1.6 272,199 - -0.2 272,205 - +0.8 272,215 + -1.0 272,215 + +0.2 272,216 - -0.2 272,216 - -0.1 272,218 - +1.2 272,396 + -0.8 272,396 + +0.1 272,396 + -0.7 272,396 + +1.0 272,397 - -0.1 272,397 - +0.2 272,397 - +0.1 272,397 - +0.5 272,397 - +0.5 272,397 - -0.8 272,398 + -0.5 272,398 + +1.1 272,398 + +1.1 272,398 + -0.0 272,399 - -0.5 272,399 - -0.8 272,399 - -0.8 272,399 - +1.5 272,399 - -0.5 272,399 - +0.4 272,399 - +0.2 272,399 - +0.9 272,492 - -0.7 272,492 - -0.4 272,492 - -0.6 272,501 - +0.2 272,600 + H281DRAFT_02134 0.15 +0.1 272,638 - -0.3 272,688 + H281DRAFT_02134 0.25 +1.0 272,688 + H281DRAFT_02134 0.25 +0.7 272,691 + H281DRAFT_02134 0.25 -0.2 272,692 - H281DRAFT_02134 0.26 +0.8 272,692 - H281DRAFT_02134 0.26 +1.1 272,698 + H281DRAFT_02134 0.26 +1.2 272,698 + H281DRAFT_02134 0.26 +0.5 272,701 - H281DRAFT_02134 0.27 +0.3 272,745 + H281DRAFT_02134 0.32 -0.3 272,754 + H281DRAFT_02134 0.33 +0.9 272,810 + H281DRAFT_02134 0.39 +0.0 272,853 + H281DRAFT_02134 0.44 +0.5 272,853 + H281DRAFT_02134 0.44 -0.2 272,854 - H281DRAFT_02134 0.44 -0.5 272,854 - H281DRAFT_02134 0.44 +0.3 272,903 - H281DRAFT_02134 0.50 -0.3 272,992 - H281DRAFT_02134 0.60 +0.4 273,089 + H281DRAFT_02134 0.71 +0.1 273,109 + H281DRAFT_02134 0.73 +1.2 273,110 - H281DRAFT_02134 0.73 +0.2 273,112 - H281DRAFT_02134 0.74 +0.9 273,134 - H281DRAFT_02134 0.76 -0.3 273,134 - H281DRAFT_02134 0.76 +0.1 273,209 + H281DRAFT_02134 0.85 +0.2 273,237 - H281DRAFT_02134 0.88 +0.5 273,252 + H281DRAFT_02134 0.89 -1.2 273,252 + H281DRAFT_02134 0.89 -0.9 273,253 - H281DRAFT_02134 0.90 -0.9 273,322 + +0.1 273,344 - +0.2 273,357 + -0.1 273,357 + -3.2 273,357 + -0.8 273,357 + -0.7 273,358 - +0.2 273,358 - -0.3 273,430 + -0.6 273,453 - +0.6 273,453 - -0.2 273,453 - +0.9 273,459 + -0.3 273,459 + +0.4 273,503 + +0.8 273,619 - H281DRAFT_02135 0.28 +0.1 273,619 - H281DRAFT_02135 0.28 +1.5 273,670 + H281DRAFT_02135 0.45 -1.0 273,687 + H281DRAFT_02135 0.50 -0.2 273,687 + H281DRAFT_02135 0.50 -0.6 273,688 - H281DRAFT_02135 0.51 +0.2 273,736 + H281DRAFT_02135 0.67 +0.5 273,736 + H281DRAFT_02135 0.67 +0.2 273,757 + H281DRAFT_02135 0.74 +0.3 273,805 + H281DRAFT_02135 0.90 -1.1 273,806 - +0.0 273,806 - -0.3 273,806 - +0.2 273,817 + +1.4 273,817 + -0.3 273,818 - +0.3 273,818 - +0.1 273,818 - -0.1 273,818 - -0.7 273,838 + +1.0 273,838 + +0.0 273,905 + +1.5 273,905 + +0.0 273,905 + +0.7 273,906 - +1.2 273,906 - -0.1 273,972 + +0.4 273,976 - -1.0 274,129 + -0.8 274,129 + H281DRAFT_02136 0.28 -1.5 274,129 + H281DRAFT_02136 0.28 +0.0 274,190 + H281DRAFT_02136 0.39 -1.0
Or see this region's nucleotide sequence