Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01939 and H281DRAFT_01940 are separated by 163 nucleotides H281DRAFT_01940 and H281DRAFT_01941 are separated by 149 nucleotides H281DRAFT_01941 and H281DRAFT_01942 are separated by 114 nucleotides
H281DRAFT_01939: H281DRAFT_01939 - ribose-phosphate pyrophosphokinase, at 55,486 to 56,442
_01939
H281DRAFT_01940: H281DRAFT_01940 - LSU ribosomal protein L25P, at 56,606 to 57,223
_01940
H281DRAFT_01941: H281DRAFT_01941 - peptidyl-tRNA hydrolase, at 57,373 to 57,975
_01941
H281DRAFT_01942: H281DRAFT_01942 - histidinol-phosphate aminotransferase, at 58,090 to 59,169
_01942
Position (kb) 57
58 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 56.440 kb on + strand at 56.444 kb on + strand at 57.322 kb on + strand at 57.928 kb on - strand at 57.973 kb on + strand at 57.973 kb on + strand at 57.974 kb on - strand at 57.974 kb on - strand at 58.078 kb on + strand at 58.132 kb on + strand at 58.133 kb on - strand at 58.133 kb on - strand at 58.401 kb on + strand, within H281DRAFT_01942 at 58.401 kb on + strand, within H281DRAFT_01942 at 58.401 kb on + strand, within H281DRAFT_01942 at 58.401 kb on + strand, within H281DRAFT_01942 at 58.402 kb on - strand, within H281DRAFT_01942 at 58.402 kb on - strand, within H281DRAFT_01942 at 58.402 kb on - strand, within H281DRAFT_01942 at 58.402 kb on - strand, within H281DRAFT_01942 at 58.402 kb on - strand, within H281DRAFT_01942 at 58.429 kb on + strand, within H281DRAFT_01942 at 58.429 kb on + strand, within H281DRAFT_01942 at 58.429 kb on + strand, within H281DRAFT_01942 at 58.430 kb on - strand, within H281DRAFT_01942 at 58.430 kb on - strand, within H281DRAFT_01942 at 58.438 kb on + strand, within H281DRAFT_01942 at 58.447 kb on + strand, within H281DRAFT_01942 at 58.447 kb on + strand, within H281DRAFT_01942 at 58.447 kb on + strand, within H281DRAFT_01942 at 58.519 kb on + strand, within H281DRAFT_01942 at 58.520 kb on - strand at 58.608 kb on - strand, within H281DRAFT_01942 at 58.648 kb on + strand, within H281DRAFT_01942 at 58.648 kb on + strand, within H281DRAFT_01942 at 58.648 kb on + strand, within H281DRAFT_01942 at 58.649 kb on - strand, within H281DRAFT_01942 at 58.802 kb on + strand, within H281DRAFT_01942 at 58.803 kb on - strand, within H281DRAFT_01942 at 58.803 kb on - strand, within H281DRAFT_01942 at 58.865 kb on - strand, within H281DRAFT_01942 at 58.904 kb on + strand, within H281DRAFT_01942 at 58.904 kb on + strand, within H281DRAFT_01942 at 58.904 kb on + strand, within H281DRAFT_01942 at 58.905 kb on - strand, within H281DRAFT_01942 at 58.938 kb on - strand, within H281DRAFT_01942 at 58.946 kb on + strand, within H281DRAFT_01942 at 58.946 kb on + strand, within H281DRAFT_01942 at 58.974 kb on + strand, within H281DRAFT_01942
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 56,440 + -0.4 56,444 + +0.6 57,322 + -0.2 57,928 - -2.8 57,973 + +1.6 57,973 + -0.4 57,974 - +0.2 57,974 - -0.0 58,078 + +0.5 58,132 + +0.0 58,133 - -0.7 58,133 - -0.0 58,401 + H281DRAFT_01942 0.29 +0.3 58,401 + H281DRAFT_01942 0.29 -0.1 58,401 + H281DRAFT_01942 0.29 -1.0 58,401 + H281DRAFT_01942 0.29 +3.2 58,402 - H281DRAFT_01942 0.29 +0.2 58,402 - H281DRAFT_01942 0.29 +0.9 58,402 - H281DRAFT_01942 0.29 +0.2 58,402 - H281DRAFT_01942 0.29 +1.2 58,402 - H281DRAFT_01942 0.29 +0.3 58,429 + H281DRAFT_01942 0.31 +0.5 58,429 + H281DRAFT_01942 0.31 -0.2 58,429 + H281DRAFT_01942 0.31 +0.3 58,430 - H281DRAFT_01942 0.31 +0.5 58,430 - H281DRAFT_01942 0.31 +0.2 58,438 + H281DRAFT_01942 0.32 -1.0 58,447 + H281DRAFT_01942 0.33 +0.5 58,447 + H281DRAFT_01942 0.33 +0.5 58,447 + H281DRAFT_01942 0.33 -1.1 58,519 + H281DRAFT_01942 0.40 +0.9 58,520 - +0.6 58,608 - H281DRAFT_01942 0.48 -0.1 58,648 + H281DRAFT_01942 0.52 +2.0 58,648 + H281DRAFT_01942 0.52 -0.9 58,648 + H281DRAFT_01942 0.52 +1.0 58,649 - H281DRAFT_01942 0.52 +0.5 58,802 + H281DRAFT_01942 0.66 +0.3 58,803 - H281DRAFT_01942 0.66 +0.4 58,803 - H281DRAFT_01942 0.66 +0.6 58,865 - H281DRAFT_01942 0.72 -0.2 58,904 + H281DRAFT_01942 0.75 +0.6 58,904 + H281DRAFT_01942 0.75 +0.6 58,904 + H281DRAFT_01942 0.75 -0.1 58,905 - H281DRAFT_01942 0.75 +0.3 58,938 - H281DRAFT_01942 0.79 +0.0 58,946 + H281DRAFT_01942 0.79 +1.0 58,946 + H281DRAFT_01942 0.79 +0.7 58,974 + H281DRAFT_01942 0.82 -1.8
Or see this region's nucleotide sequence