Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01900 and H281DRAFT_01901 are separated by 247 nucleotides H281DRAFT_01901 and H281DRAFT_01902 are separated by 94 nucleotides
H281DRAFT_01900: H281DRAFT_01900 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 11,983 to 13,323
_01900
H281DRAFT_01901: H281DRAFT_01901 - Sugar phosphate permease, at 13,571 to 15,094
_01901
H281DRAFT_01902: H281DRAFT_01902 - transcriptional regulator, LysR family, at 15,189 to 16,076
_01902
Position (kb) 13
14
15
16 Strain fitness (log2 ratio) -2
-1
0
1 at 12.597 kb on - strand, within H281DRAFT_01900 at 12.604 kb on + strand, within H281DRAFT_01900 at 12.604 kb on + strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.615 kb on + strand, within H281DRAFT_01900 at 12.615 kb on + strand, within H281DRAFT_01900 at 12.616 kb on - strand, within H281DRAFT_01900 at 12.616 kb on - strand, within H281DRAFT_01900 at 12.641 kb on + strand, within H281DRAFT_01900 at 12.641 kb on + strand, within H281DRAFT_01900 at 12.642 kb on - strand, within H281DRAFT_01900 at 12.982 kb on + strand, within H281DRAFT_01900 at 13.167 kb on + strand, within H281DRAFT_01900 at 13.167 kb on + strand, within H281DRAFT_01900 at 13.167 kb on + strand, within H281DRAFT_01900 at 13.168 kb on - strand, within H281DRAFT_01900 at 13.168 kb on - strand, within H281DRAFT_01900 at 13.168 kb on - strand, within H281DRAFT_01900 at 13.173 kb on + strand, within H281DRAFT_01900 at 13.248 kb on + strand at 13.254 kb on + strand at 13.265 kb on + strand at 13.265 kb on + strand at 13.266 kb on - strand at 13.266 kb on - strand at 13.317 kb on + strand at 13.318 kb on - strand at 13.342 kb on + strand at 13.342 kb on + strand at 13.343 kb on - strand at 13.343 kb on - strand at 13.362 kb on + strand at 13.505 kb on - strand at 13.505 kb on - strand at 13.698 kb on - strand at 13.750 kb on + strand, within H281DRAFT_01901 at 13.750 kb on + strand, within H281DRAFT_01901 at 13.750 kb on + strand, within H281DRAFT_01901 at 13.751 kb on - strand, within H281DRAFT_01901 at 13.751 kb on - strand, within H281DRAFT_01901 at 13.977 kb on + strand, within H281DRAFT_01901 at 13.978 kb on - strand, within H281DRAFT_01901 at 13.978 kb on - strand, within H281DRAFT_01901 at 14.169 kb on - strand, within H281DRAFT_01901 at 14.225 kb on - strand, within H281DRAFT_01901 at 14.437 kb on - strand, within H281DRAFT_01901 at 14.466 kb on + strand, within H281DRAFT_01901 at 14.466 kb on + strand, within H281DRAFT_01901 at 14.466 kb on + strand, within H281DRAFT_01901 at 14.466 kb on + strand, within H281DRAFT_01901 at 14.467 kb on - strand, within H281DRAFT_01901 at 14.535 kb on + strand, within H281DRAFT_01901 at 14.536 kb on - strand, within H281DRAFT_01901 at 14.536 kb on - strand, within H281DRAFT_01901 at 15.026 kb on + strand at 15.080 kb on + strand at 15.121 kb on - strand at 15.158 kb on + strand at 15.179 kb on - strand at 15.220 kb on + strand at 15.220 kb on + strand at 15.221 kb on - strand at 15.495 kb on + strand, within H281DRAFT_01902 at 15.496 kb on - strand, within H281DRAFT_01902 at 15.498 kb on + strand, within H281DRAFT_01902 at 15.498 kb on + strand, within H281DRAFT_01902 at 15.765 kb on + strand, within H281DRAFT_01902 at 15.766 kb on - strand, within H281DRAFT_01902 at 15.843 kb on + strand, within H281DRAFT_01902 at 15.843 kb on + strand, within H281DRAFT_01902 at 15.843 kb on + strand at 15.843 kb on + strand, within H281DRAFT_01902 at 15.844 kb on - strand, within H281DRAFT_01902 at 15.844 kb on - strand, within H281DRAFT_01902 at 15.844 kb on - strand, within H281DRAFT_01902
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 12,597 - H281DRAFT_01900 0.46 -0.3 12,604 + H281DRAFT_01900 0.46 -0.3 12,604 + H281DRAFT_01900 0.46 +0.6 12,605 - H281DRAFT_01900 0.46 +0.8 12,605 - H281DRAFT_01900 0.46 +0.5 12,605 - H281DRAFT_01900 0.46 -1.0 12,615 + H281DRAFT_01900 0.47 +0.1 12,615 + H281DRAFT_01900 0.47 +0.5 12,616 - H281DRAFT_01900 0.47 +1.2 12,616 - H281DRAFT_01900 0.47 +1.6 12,641 + H281DRAFT_01900 0.49 +0.0 12,641 + H281DRAFT_01900 0.49 +0.6 12,642 - H281DRAFT_01900 0.49 +0.0 12,982 + H281DRAFT_01900 0.74 +0.8 13,167 + H281DRAFT_01900 0.88 +0.2 13,167 + H281DRAFT_01900 0.88 +0.2 13,167 + H281DRAFT_01900 0.88 -0.2 13,168 - H281DRAFT_01900 0.88 +0.1 13,168 - H281DRAFT_01900 0.88 +1.0 13,168 - H281DRAFT_01900 0.88 -0.1 13,173 + H281DRAFT_01900 0.89 -1.2 13,248 + +0.6 13,254 + +1.5 13,265 + -0.7 13,265 + +0.2 13,266 - -0.3 13,266 - -0.4 13,317 + -0.4 13,318 - +0.9 13,342 + +0.2 13,342 + -0.3 13,343 - +0.2 13,343 - +1.2 13,362 + +1.2 13,505 - +0.3 13,505 - +0.1 13,698 - +0.6 13,750 + H281DRAFT_01901 0.12 +0.0 13,750 + H281DRAFT_01901 0.12 +0.0 13,750 + H281DRAFT_01901 0.12 -1.8 13,751 - H281DRAFT_01901 0.12 +0.4 13,751 - H281DRAFT_01901 0.12 -0.3 13,977 + H281DRAFT_01901 0.27 -0.0 13,978 - H281DRAFT_01901 0.27 +0.3 13,978 - H281DRAFT_01901 0.27 +0.9 14,169 - H281DRAFT_01901 0.39 +0.7 14,225 - H281DRAFT_01901 0.43 +1.0 14,437 - H281DRAFT_01901 0.57 +0.8 14,466 + H281DRAFT_01901 0.59 +0.4 14,466 + H281DRAFT_01901 0.59 +0.1 14,466 + H281DRAFT_01901 0.59 -0.4 14,466 + H281DRAFT_01901 0.59 +0.2 14,467 - H281DRAFT_01901 0.59 -0.1 14,535 + H281DRAFT_01901 0.63 +0.6 14,536 - H281DRAFT_01901 0.63 +0.6 14,536 - H281DRAFT_01901 0.63 +0.7 15,026 + +0.9 15,080 + -0.3 15,121 - +0.6 15,158 + +0.2 15,179 - +0.2 15,220 + -0.5 15,220 + +0.2 15,221 - -0.4 15,495 + H281DRAFT_01902 0.34 +0.9 15,496 - H281DRAFT_01902 0.35 -0.3 15,498 + H281DRAFT_01902 0.35 +0.7 15,498 + H281DRAFT_01902 0.35 +0.8 15,765 + H281DRAFT_01902 0.65 +0.6 15,766 - H281DRAFT_01902 0.65 +0.2 15,843 + H281DRAFT_01902 0.74 +1.2 15,843 + H281DRAFT_01902 0.74 -0.3 15,843 + -0.4 15,843 + H281DRAFT_01902 0.74 +0.2 15,844 - H281DRAFT_01902 0.74 +0.2 15,844 - H281DRAFT_01902 0.74 +0.2 15,844 - H281DRAFT_01902 0.74 -1.6
Or see this region's nucleotide sequence