Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01897 and H281DRAFT_01898 are separated by 131 nucleotides H281DRAFT_01898 and H281DRAFT_01899 are separated by 117 nucleotides H281DRAFT_01899 and H281DRAFT_01900 are separated by 115 nucleotides
H281DRAFT_01897: H281DRAFT_01897 - Acetyl esterase/lipase, at 10,102 to 11,064
_01897
H281DRAFT_01898: H281DRAFT_01898 - CHRD domain-containing protein, at 11,196 to 11,630
_01898
H281DRAFT_01899: H281DRAFT_01899 - hypothetical protein, at 11,748 to 11,867
_01899
H281DRAFT_01900: H281DRAFT_01900 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 11,983 to 13,323
_01900
Position (kb)
11
12 Strain fitness (log2 ratio)
-1
0
1
2 at 10.802 kb on + strand, within H281DRAFT_01897 at 10.802 kb on + strand, within H281DRAFT_01897 at 10.802 kb on + strand, within H281DRAFT_01897 at 10.803 kb on - strand, within H281DRAFT_01897 at 10.823 kb on + strand, within H281DRAFT_01897 at 10.823 kb on + strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 10.824 kb on - strand, within H281DRAFT_01897 at 11.099 kb on + strand at 11.099 kb on + strand at 11.099 kb on + strand at 11.099 kb on + strand at 11.100 kb on - strand at 11.100 kb on - strand at 11.197 kb on + strand at 11.197 kb on + strand at 11.198 kb on - strand at 11.198 kb on - strand at 11.198 kb on - strand at 11.249 kb on + strand at 11.263 kb on + strand, within H281DRAFT_01898 at 11.263 kb on + strand at 11.264 kb on - strand, within H281DRAFT_01898 at 11.289 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.434 kb on + strand, within H281DRAFT_01898 at 11.435 kb on - strand, within H281DRAFT_01898 at 11.505 kb on + strand, within H281DRAFT_01898 at 11.506 kb on - strand, within H281DRAFT_01898 at 11.506 kb on - strand, within H281DRAFT_01898 at 11.506 kb on - strand, within H281DRAFT_01898 at 11.548 kb on - strand, within H281DRAFT_01898 at 11.624 kb on + strand at 11.644 kb on + strand at 11.692 kb on + strand at 11.692 kb on + strand at 11.692 kb on + strand at 11.692 kb on + strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.693 kb on - strand at 11.695 kb on + strand at 11.695 kb on + strand at 11.695 kb on + strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.696 kb on - strand at 11.741 kb on + strand at 11.742 kb on - strand at 11.775 kb on - strand, within H281DRAFT_01899 at 11.793 kb on + strand, within H281DRAFT_01899 at 11.834 kb on + strand, within H281DRAFT_01899 at 11.835 kb on - strand, within H281DRAFT_01899 at 11.835 kb on - strand, within H281DRAFT_01899 at 12.057 kb on + strand at 12.087 kb on + strand at 12.373 kb on - strand, within H281DRAFT_01900 at 12.373 kb on - strand, within H281DRAFT_01900 at 12.425 kb on + strand, within H281DRAFT_01900 at 12.597 kb on - strand, within H281DRAFT_01900 at 12.604 kb on + strand, within H281DRAFT_01900 at 12.604 kb on + strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.605 kb on - strand, within H281DRAFT_01900 at 12.615 kb on + strand, within H281DRAFT_01900 at 12.615 kb on + strand, within H281DRAFT_01900 at 12.616 kb on - strand, within H281DRAFT_01900 at 12.616 kb on - strand, within H281DRAFT_01900 at 12.641 kb on + strand, within H281DRAFT_01900 at 12.641 kb on + strand, within H281DRAFT_01900 at 12.642 kb on - strand, within H281DRAFT_01900
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 10,802 + H281DRAFT_01897 0.73 -0.1 10,802 + H281DRAFT_01897 0.73 -1.0 10,802 + H281DRAFT_01897 0.73 +0.1 10,803 - H281DRAFT_01897 0.73 +0.6 10,823 + H281DRAFT_01897 0.75 +1.2 10,823 + H281DRAFT_01897 0.75 +0.6 10,824 - H281DRAFT_01897 0.75 -0.8 10,824 - H281DRAFT_01897 0.75 -0.2 10,824 - H281DRAFT_01897 0.75 -0.2 10,824 - H281DRAFT_01897 0.75 +0.4 11,099 + +0.3 11,099 + -0.1 11,099 + +0.5 11,099 + -0.4 11,100 - +0.6 11,100 - +0.1 11,197 + +0.0 11,197 + -1.2 11,198 - +1.7 11,198 - -0.3 11,198 - +1.0 11,249 + +1.6 11,263 + H281DRAFT_01898 0.15 -0.1 11,263 + +1.9 11,264 - H281DRAFT_01898 0.16 +0.1 11,289 + H281DRAFT_01898 0.21 +1.8 11,434 + H281DRAFT_01898 0.55 +1.2 11,434 + H281DRAFT_01898 0.55 -0.0 11,434 + H281DRAFT_01898 0.55 +0.5 11,434 + H281DRAFT_01898 0.55 +0.1 11,435 - H281DRAFT_01898 0.55 +0.5 11,505 + H281DRAFT_01898 0.71 +0.6 11,506 - H281DRAFT_01898 0.71 -1.0 11,506 - H281DRAFT_01898 0.71 -1.4 11,506 - H281DRAFT_01898 0.71 +0.7 11,548 - H281DRAFT_01898 0.81 -0.2 11,624 + +0.7 11,644 + +0.1 11,692 + -0.4 11,692 + +0.2 11,692 + +1.3 11,692 + +0.9 11,693 - -0.1 11,693 - -0.9 11,693 - +0.5 11,693 - +0.2 11,693 - +0.3 11,695 + +0.7 11,695 + -0.1 11,695 + -0.2 11,696 - -0.6 11,696 - -1.0 11,696 - +2.2 11,696 - +0.7 11,696 - -0.1 11,741 + +1.2 11,742 - +1.0 11,775 - H281DRAFT_01899 0.23 -0.1 11,793 + H281DRAFT_01899 0.38 +0.4 11,834 + H281DRAFT_01899 0.72 +0.3 11,835 - H281DRAFT_01899 0.72 +0.6 11,835 - H281DRAFT_01899 0.72 -0.2 12,057 + +0.2 12,087 + +0.7 12,373 - H281DRAFT_01900 0.29 +1.0 12,373 - H281DRAFT_01900 0.29 +0.6 12,425 + H281DRAFT_01900 0.33 +0.3 12,597 - H281DRAFT_01900 0.46 -0.3 12,604 + H281DRAFT_01900 0.46 -0.3 12,604 + H281DRAFT_01900 0.46 +0.6 12,605 - H281DRAFT_01900 0.46 +0.8 12,605 - H281DRAFT_01900 0.46 +0.5 12,605 - H281DRAFT_01900 0.46 -1.0 12,615 + H281DRAFT_01900 0.47 +0.1 12,615 + H281DRAFT_01900 0.47 +0.5 12,616 - H281DRAFT_01900 0.47 +1.2 12,616 - H281DRAFT_01900 0.47 +1.6 12,641 + H281DRAFT_01900 0.49 +0.0 12,641 + H281DRAFT_01900 0.49 +0.6 12,642 - H281DRAFT_01900 0.49 +0.0
Or see this region's nucleotide sequence