Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01611 and H281DRAFT_01612 overlap by 4 nucleotides H281DRAFT_01612 and H281DRAFT_01613 overlap by 4 nucleotides H281DRAFT_01613 and H281DRAFT_01614 are separated by 278 nucleotides
H281DRAFT_01611: H281DRAFT_01611 - putative membrane protein, at 492,320 to 493,339
_01611
H281DRAFT_01612: H281DRAFT_01612 - 2OG-Fe(II) oxygenase superfamily protein, at 493,336 to 494,169
_01612
H281DRAFT_01613: H281DRAFT_01613 - Phosphatidylglycerophosphate synthase, at 494,166 to 494,867
_01613
H281DRAFT_01614: H281DRAFT_01614 - hypothetical protein, at 495,146 to 495,604
_01614
Position (kb) 493
494
495 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 492.492 kb on + strand, within H281DRAFT_01611 at 493.385 kb on - strand at 493.385 kb on - strand at 493.404 kb on - strand at 493.670 kb on + strand, within H281DRAFT_01612 at 493.685 kb on + strand, within H281DRAFT_01612 at 493.686 kb on - strand, within H281DRAFT_01612 at 493.688 kb on + strand, within H281DRAFT_01612 at 493.700 kb on + strand, within H281DRAFT_01612 at 493.700 kb on + strand, within H281DRAFT_01612 at 493.733 kb on + strand, within H281DRAFT_01612 at 493.733 kb on + strand, within H281DRAFT_01612 at 493.736 kb on + strand, within H281DRAFT_01612 at 493.739 kb on + strand, within H281DRAFT_01612 at 493.870 kb on - strand, within H281DRAFT_01612 at 493.910 kb on + strand, within H281DRAFT_01612 at 494.128 kb on - strand at 494.163 kb on + strand at 494.164 kb on - strand at 494.181 kb on + strand at 494.182 kb on - strand at 494.182 kb on - strand at 494.251 kb on + strand, within H281DRAFT_01613 at 494.251 kb on + strand, within H281DRAFT_01613 at 494.252 kb on - strand, within H281DRAFT_01613 at 494.252 kb on - strand, within H281DRAFT_01613 at 494.262 kb on + strand, within H281DRAFT_01613 at 494.350 kb on + strand, within H281DRAFT_01613 at 494.350 kb on + strand, within H281DRAFT_01613 at 494.351 kb on - strand, within H281DRAFT_01613 at 494.351 kb on - strand, within H281DRAFT_01613 at 494.351 kb on - strand, within H281DRAFT_01613 at 494.351 kb on - strand, within H281DRAFT_01613 at 494.777 kb on + strand, within H281DRAFT_01613 at 494.778 kb on - strand, within H281DRAFT_01613 at 494.778 kb on - strand, within H281DRAFT_01613 at 494.841 kb on - strand at 494.878 kb on + strand at 494.878 kb on + strand at 494.878 kb on + strand at 494.880 kb on + strand at 494.881 kb on - strand at 494.883 kb on - strand at 494.964 kb on - strand at 494.964 kb on - strand at 494.964 kb on - strand at 495.075 kb on - strand at 495.101 kb on + strand at 495.101 kb on + strand at 495.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 492,492 + H281DRAFT_01611 0.17 +0.3 493,385 - +1.3 493,385 - -0.3 493,404 - +1.6 493,670 + H281DRAFT_01612 0.40 +1.7 493,685 + H281DRAFT_01612 0.42 +0.9 493,686 - H281DRAFT_01612 0.42 -1.8 493,688 + H281DRAFT_01612 0.42 +2.6 493,700 + H281DRAFT_01612 0.44 +2.1 493,700 + H281DRAFT_01612 0.44 +1.3 493,733 + H281DRAFT_01612 0.48 +1.4 493,733 + H281DRAFT_01612 0.48 +1.2 493,736 + H281DRAFT_01612 0.48 +0.3 493,739 + H281DRAFT_01612 0.48 +1.3 493,870 - H281DRAFT_01612 0.64 +0.8 493,910 + H281DRAFT_01612 0.69 +1.1 494,128 - +1.9 494,163 + +2.9 494,164 - +0.9 494,181 + +0.3 494,182 - +0.7 494,182 - +1.5 494,251 + H281DRAFT_01613 0.12 -0.0 494,251 + H281DRAFT_01613 0.12 +0.3 494,252 - H281DRAFT_01613 0.12 -0.0 494,252 - H281DRAFT_01613 0.12 +1.2 494,262 + H281DRAFT_01613 0.14 +0.2 494,350 + H281DRAFT_01613 0.26 +1.1 494,350 + H281DRAFT_01613 0.26 +1.1 494,351 - H281DRAFT_01613 0.26 +1.3 494,351 - H281DRAFT_01613 0.26 +2.3 494,351 - H281DRAFT_01613 0.26 +0.1 494,351 - H281DRAFT_01613 0.26 +1.3 494,777 + H281DRAFT_01613 0.87 +2.5 494,778 - H281DRAFT_01613 0.87 +0.5 494,778 - H281DRAFT_01613 0.87 +0.1 494,841 - +0.6 494,878 + +1.4 494,878 + +1.5 494,878 + +1.1 494,880 + +1.4 494,881 - +1.1 494,883 - -0.2 494,964 - -0.5 494,964 - -0.1 494,964 - -0.0 495,075 - -0.0 495,101 + +0.3 495,101 + +0.4 495,102 - +0.7
Or see this region's nucleotide sequence