Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01597 and H281DRAFT_01598 are separated by 436 nucleotides H281DRAFT_01598 and H281DRAFT_01599 are separated by 126 nucleotides H281DRAFT_01599 and H281DRAFT_01600 are separated by 39 nucleotides
H281DRAFT_01597: H281DRAFT_01597 - 3-oxoadipate CoA-transferase alpha subunit, at 475,615 to 476,322
_01597
H281DRAFT_01598: H281DRAFT_01598 - transcriptional regulator, LysR family, at 476,759 to 477,688
_01598
H281DRAFT_01599: H281DRAFT_01599 - GTP cyclohydrolase I, at 477,815 to 478,453
_01599
H281DRAFT_01600: H281DRAFT_01600 - Permease of the drug/metabolite transporter (DMT) superfamily, at 478,493 to 479,401
_01600
Position (kb) 476
477
478 Strain fitness (log2 ratio) -2
-1
0
1 at 475.809 kb on + strand, within H281DRAFT_01597 at 475.844 kb on + strand, within H281DRAFT_01597 at 475.892 kb on + strand, within H281DRAFT_01597 at 475.892 kb on + strand, within H281DRAFT_01597 at 475.893 kb on - strand, within H281DRAFT_01597 at 476.070 kb on - strand, within H281DRAFT_01597 at 476.570 kb on + strand at 476.701 kb on + strand at 476.722 kb on + strand at 476.722 kb on + strand at 476.935 kb on + strand, within H281DRAFT_01598 at 476.935 kb on + strand, within H281DRAFT_01598 at 476.937 kb on - strand, within H281DRAFT_01598 at 477.049 kb on + strand, within H281DRAFT_01598 at 477.050 kb on - strand, within H281DRAFT_01598 at 477.050 kb on - strand, within H281DRAFT_01598 at 477.518 kb on + strand, within H281DRAFT_01598 at 477.519 kb on - strand, within H281DRAFT_01598 at 477.974 kb on + strand, within H281DRAFT_01599 at 477.975 kb on - strand, within H281DRAFT_01599 at 478.451 kb on + strand at 478.452 kb on - strand at 478.601 kb on + strand, within H281DRAFT_01600
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 475,809 + H281DRAFT_01597 0.27 +0.8 475,844 + H281DRAFT_01597 0.32 -0.5 475,892 + H281DRAFT_01597 0.39 -0.3 475,892 + H281DRAFT_01597 0.39 -0.1 475,893 - H281DRAFT_01597 0.39 -0.6 476,070 - H281DRAFT_01597 0.64 +1.1 476,570 + -0.5 476,701 + -0.2 476,722 + -0.4 476,722 + -1.5 476,935 + H281DRAFT_01598 0.19 +1.1 476,935 + H281DRAFT_01598 0.19 -0.9 476,937 - H281DRAFT_01598 0.19 -1.8 477,049 + H281DRAFT_01598 0.31 +0.1 477,050 - H281DRAFT_01598 0.31 -0.7 477,050 - H281DRAFT_01598 0.31 -0.8 477,518 + H281DRAFT_01598 0.82 +0.4 477,519 - H281DRAFT_01598 0.82 +0.4 477,974 + H281DRAFT_01599 0.25 -1.0 477,975 - H281DRAFT_01599 0.25 -0.9 478,451 + +0.6 478,452 - -0.6 478,601 + H281DRAFT_01600 0.12 -0.8
Or see this region's nucleotide sequence