Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01294 and H281DRAFT_01295 are separated by 30 nucleotides H281DRAFT_01295 and H281DRAFT_01296 are separated by 236 nucleotides H281DRAFT_01296 and H281DRAFT_01297 are separated by 523 nucleotides
H281DRAFT_01294: H281DRAFT_01294 - amino acid ABC transporter substrate-binding protein, PAAT family, at 131,822 to 132,736
_01294
H281DRAFT_01295: H281DRAFT_01295 - Cytochrome C oxidase, cbb3-type, subunit III, at 132,767 to 133,186
_01295
H281DRAFT_01296: H281DRAFT_01296 - PQQ-dependent dehydrogenase, methanol/ethanol family, at 133,423 to 135,240
_01296
H281DRAFT_01297: H281DRAFT_01297 - pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96), at 135,764 to 136,171
_01297
Position (kb) 133
134
135
136 Strain fitness (log2 ratio) -1
0
1 at 132.679 kb on - strand at 133.049 kb on - strand, within H281DRAFT_01295 at 133.083 kb on + strand, within H281DRAFT_01295 at 133.120 kb on - strand, within H281DRAFT_01295 at 133.278 kb on - strand at 133.288 kb on + strand at 133.289 kb on - strand at 133.310 kb on + strand at 133.613 kb on + strand, within H281DRAFT_01296 at 133.715 kb on + strand, within H281DRAFT_01296 at 133.917 kb on - strand, within H281DRAFT_01296 at 134.832 kb on - strand, within H281DRAFT_01296 at 134.967 kb on + strand at 134.969 kb on + strand, within H281DRAFT_01296 at 135.473 kb on - strand at 135.593 kb on + strand at 135.593 kb on + strand at 135.594 kb on - strand at 135.785 kb on + strand at 135.786 kb on - strand at 135.786 kb on - strand at 135.963 kb on - strand, within H281DRAFT_01297
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 132,679 - -0.6 133,049 - H281DRAFT_01295 0.67 -0.3 133,083 + H281DRAFT_01295 0.75 -0.4 133,120 - H281DRAFT_01295 0.84 -0.1 133,278 - +0.0 133,288 + -0.7 133,289 - -0.1 133,310 + -0.4 133,613 + H281DRAFT_01296 0.10 -0.3 133,715 + H281DRAFT_01296 0.16 -0.8 133,917 - H281DRAFT_01296 0.27 -0.4 134,832 - H281DRAFT_01296 0.78 +0.3 134,967 + -0.7 134,969 + H281DRAFT_01296 0.85 +0.0 135,473 - +1.4 135,593 + -0.6 135,593 + +1.3 135,594 - -0.0 135,785 + +0.2 135,786 - -0.1 135,786 - +0.0 135,963 - H281DRAFT_01297 0.49 +0.3
Or see this region's nucleotide sequence