Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01241 and H281DRAFT_01242 are separated by 255 nucleotides H281DRAFT_01242 and H281DRAFT_01243 are separated by 57 nucleotides H281DRAFT_01243 and H281DRAFT_01244 overlap by 4 nucleotides
H281DRAFT_01241: H281DRAFT_01241 - mandelamide amidase, at 77,395 to 78,849
_01241
H281DRAFT_01242: H281DRAFT_01242 - CDP-diacylglycerol pyrophosphatase, at 79,105 to 79,746
_01242
H281DRAFT_01243: H281DRAFT_01243 - lipoprotein, YaeC family, at 79,804 to 80,616
_01243
H281DRAFT_01244: H281DRAFT_01244 - Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain, at 80,613 to 81,662
_01244
Position (kb) 79
80 Strain fitness (log2 ratio) -1
0
1
2 at 78.517 kb on + strand, within H281DRAFT_01241 at 78.517 kb on + strand, within H281DRAFT_01241 at 78.648 kb on + strand, within H281DRAFT_01241 at 78.673 kb on - strand, within H281DRAFT_01241 at 78.818 kb on + strand at 78.875 kb on + strand at 79.213 kb on + strand, within H281DRAFT_01242 at 79.213 kb on + strand, within H281DRAFT_01242 at 79.744 kb on + strand at 79.940 kb on + strand, within H281DRAFT_01243 at 80.303 kb on + strand, within H281DRAFT_01243 at 80.595 kb on + strand at 80.652 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 78,517 + H281DRAFT_01241 0.77 -0.7 78,517 + H281DRAFT_01241 0.77 -0.2 78,648 + H281DRAFT_01241 0.86 +2.1 78,673 - H281DRAFT_01241 0.88 +0.7 78,818 + +0.6 78,875 + -0.1 79,213 + H281DRAFT_01242 0.17 +0.5 79,213 + H281DRAFT_01242 0.17 +1.2 79,744 + -0.3 79,940 + H281DRAFT_01243 0.17 -1.2 80,303 + H281DRAFT_01243 0.61 +0.4 80,595 + +0.4 80,652 - -0.0
Or see this region's nucleotide sequence