Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01233 and H281DRAFT_01234 are separated by 58 nucleotides H281DRAFT_01234 and H281DRAFT_01235 are separated by 619 nucleotides H281DRAFT_01235 and H281DRAFT_01236 are separated by 28 nucleotides H281DRAFT_01236 and H281DRAFT_01237 are separated by 148 nucleotides
H281DRAFT_01233: H281DRAFT_01233 - hypothetical protein, at 71,722 to 71,994
_01233
H281DRAFT_01234: H281DRAFT_01234 - hypothetical protein, at 72,053 to 72,361
_01234
H281DRAFT_01235: H281DRAFT_01235 - DNA-binding protein H-NS, at 72,981 to 73,307
_01235
H281DRAFT_01236: H281DRAFT_01236 - Protein-tyrosine-phosphatase, at 73,336 to 73,845
_01236
H281DRAFT_01237: H281DRAFT_01237 - DnaJ-class molecular chaperone with C-terminal Zn finger domain, at 73,994 to 74,674
_01237
Position (kb) 72
73
74 Strain fitness (log2 ratio) -2
-1
0
1 at 72.042 kb on + strand at 72.100 kb on + strand, within H281DRAFT_01234 at 72.101 kb on - strand, within H281DRAFT_01234 at 72.148 kb on - strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.192 kb on - strand, within H281DRAFT_01234 at 72.192 kb on - strand, within H281DRAFT_01234 at 72.409 kb on - strand at 72.463 kb on - strand at 72.608 kb on - strand at 72.608 kb on - strand at 72.608 kb on - strand at 72.608 kb on - strand at 72.610 kb on - strand at 72.658 kb on + strand at 72.659 kb on - strand at 72.659 kb on - strand at 72.714 kb on + strand at 72.715 kb on - strand at 72.715 kb on - strand at 72.748 kb on - strand at 72.761 kb on - strand at 72.796 kb on + strand at 72.872 kb on + strand at 72.872 kb on + strand at 72.899 kb on - strand at 72.964 kb on - strand at 72.964 kb on - strand at 72.973 kb on - strand at 72.976 kb on - strand at 73.002 kb on - strand at 73.002 kb on - strand at 73.072 kb on + strand, within H281DRAFT_01235 at 73.072 kb on + strand, within H281DRAFT_01235 at 73.072 kb on + strand at 73.073 kb on - strand, within H281DRAFT_01235 at 73.073 kb on - strand, within H281DRAFT_01235 at 73.330 kb on + strand at 73.330 kb on + strand at 73.330 kb on + strand at 73.331 kb on - strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.333 kb on - strand at 73.435 kb on + strand, within H281DRAFT_01236 at 73.436 kb on - strand, within H281DRAFT_01236 at 73.436 kb on - strand, within H281DRAFT_01236 at 73.498 kb on - strand, within H281DRAFT_01236 at 73.654 kb on + strand, within H281DRAFT_01236 at 73.655 kb on - strand, within H281DRAFT_01236 at 73.655 kb on - strand, within H281DRAFT_01236 at 73.876 kb on + strand at 73.876 kb on + strand at 73.877 kb on - strand at 73.877 kb on - strand at 73.918 kb on + strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.991 kb on + strand at 73.992 kb on - strand at 73.992 kb on - strand at 74.131 kb on + strand, within H281DRAFT_01237 at 74.198 kb on - strand, within H281DRAFT_01237
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 72,042 + +0.7 72,100 + H281DRAFT_01234 0.15 +0.6 72,101 - H281DRAFT_01234 0.16 -0.4 72,148 - H281DRAFT_01234 0.31 +1.6 72,191 + H281DRAFT_01234 0.45 +0.9 72,191 + H281DRAFT_01234 0.45 +0.4 72,191 + H281DRAFT_01234 0.45 +0.4 72,192 - H281DRAFT_01234 0.45 -0.3 72,192 - H281DRAFT_01234 0.45 +0.0 72,409 - +0.2 72,463 - +0.7 72,608 - -1.7 72,608 - +0.8 72,608 - -0.4 72,608 - +0.1 72,610 - -0.9 72,658 + +0.0 72,659 - -0.7 72,659 - -0.7 72,714 + -1.7 72,715 - -0.7 72,715 - +0.1 72,748 - -0.6 72,761 - -0.2 72,796 + +1.6 72,872 + +1.1 72,872 + +1.1 72,899 - -0.6 72,964 - -2.2 72,964 - -0.4 72,973 - -1.3 72,976 - -0.0 73,002 - -0.9 73,002 - -0.7 73,072 + H281DRAFT_01235 0.28 -1.7 73,072 + H281DRAFT_01235 0.28 -1.3 73,072 + +1.5 73,073 - H281DRAFT_01235 0.28 -1.0 73,073 - H281DRAFT_01235 0.28 -1.8 73,330 + +0.1 73,330 + +0.1 73,330 + -0.1 73,331 - +0.9 73,332 + +0.2 73,332 + -2.1 73,332 + -0.4 73,332 + +1.5 73,333 - +0.0 73,435 + H281DRAFT_01236 0.19 +1.0 73,436 - H281DRAFT_01236 0.20 +0.8 73,436 - H281DRAFT_01236 0.20 -1.3 73,498 - H281DRAFT_01236 0.32 -0.5 73,654 + H281DRAFT_01236 0.62 -0.3 73,655 - H281DRAFT_01236 0.63 -2.4 73,655 - H281DRAFT_01236 0.63 +0.5 73,876 + +0.7 73,876 + -0.6 73,877 - +0.5 73,877 - -0.1 73,918 + -0.9 73,919 - +0.5 73,919 - +0.5 73,919 - +0.4 73,919 - +0.8 73,991 + -0.2 73,992 - +0.4 73,992 - +1.0 74,131 + H281DRAFT_01237 0.20 -1.5 74,198 - H281DRAFT_01237 0.30 +0.8
Or see this region's nucleotide sequence