Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01211 and H281DRAFT_01212 are separated by 244 nucleotides H281DRAFT_01212 and H281DRAFT_01213 are separated by 49 nucleotides H281DRAFT_01213 and H281DRAFT_01214 are separated by 29 nucleotides H281DRAFT_01214 and H281DRAFT_01215 are separated by 197 nucleotides H281DRAFT_01215 and H281DRAFT_01216 are separated by 526 nucleotides
H281DRAFT_01211: H281DRAFT_01211 - Transcriptional regulator of acetoin/glycerol metabolism, at 50,561 to 52,537
_01211
H281DRAFT_01212: H281DRAFT_01212 - Ferredoxin, at 52,782 to 53,093
_01212
H281DRAFT_01213: H281DRAFT_01213 - Protein of unknown function (DUF1653), at 53,143 to 53,346
_01213
H281DRAFT_01214: H281DRAFT_01214 - Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains, at 53,376 to 54,020
_01214
H281DRAFT_01215: H281DRAFT_01215 - hypothetical protein, at 54,218 to 54,436
_01215
H281DRAFT_01216: H281DRAFT_01216 - hypothetical protein, at 54,963 to 55,250
_01216
Position (kb) 53
54
55 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 52.535 kb on + strand at 52.536 kb on - strand at 52.536 kb on - strand at 52.558 kb on + strand at 52.558 kb on + strand at 52.563 kb on + strand at 52.660 kb on + strand at 52.661 kb on - strand at 52.718 kb on - strand at 52.916 kb on + strand, within H281DRAFT_01212 at 52.916 kb on + strand, within H281DRAFT_01212 at 52.916 kb on + strand, within H281DRAFT_01212 at 52.917 kb on - strand, within H281DRAFT_01212 at 52.917 kb on - strand, within H281DRAFT_01212 at 52.964 kb on + strand, within H281DRAFT_01212 at 52.964 kb on + strand, within H281DRAFT_01212 at 52.965 kb on - strand, within H281DRAFT_01212 at 53.010 kb on + strand, within H281DRAFT_01212 at 53.010 kb on + strand, within H281DRAFT_01212 at 53.011 kb on - strand, within H281DRAFT_01212 at 53.011 kb on - strand at 53.092 kb on - strand at 53.304 kb on - strand, within H281DRAFT_01213 at 53.307 kb on + strand, within H281DRAFT_01213 at 53.308 kb on - strand, within H281DRAFT_01213 at 53.318 kb on + strand, within H281DRAFT_01213 at 53.319 kb on - strand, within H281DRAFT_01213 at 53.319 kb on - strand, within H281DRAFT_01213 at 53.409 kb on - strand at 53.410 kb on + strand at 53.513 kb on + strand, within H281DRAFT_01214 at 53.513 kb on + strand, within H281DRAFT_01214 at 53.514 kb on - strand, within H281DRAFT_01214 at 53.514 kb on - strand, within H281DRAFT_01214 at 53.514 kb on - strand, within H281DRAFT_01214 at 53.572 kb on + strand, within H281DRAFT_01214 at 53.690 kb on + strand, within H281DRAFT_01214 at 53.821 kb on + strand, within H281DRAFT_01214 at 53.821 kb on + strand, within H281DRAFT_01214 at 53.853 kb on + strand, within H281DRAFT_01214 at 53.854 kb on - strand, within H281DRAFT_01214 at 54.118 kb on - strand at 54.189 kb on - strand at 54.200 kb on + strand at 54.200 kb on + strand at 54.200 kb on + strand at 54.317 kb on - strand, within H281DRAFT_01215 at 54.335 kb on - strand, within H281DRAFT_01215 at 54.567 kb on - strand at 54.570 kb on + strand at 54.570 kb on + strand at 54.570 kb on + strand at 54.589 kb on - strand at 54.595 kb on - strand at 54.946 kb on + strand at 54.946 kb on + strand at 54.947 kb on - strand at 54.947 kb on - strand at 54.956 kb on + strand at 54.956 kb on + strand at 54.957 kb on - strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.960 kb on + strand at 54.961 kb on - strand at 54.961 kb on - strand at 54.961 kb on - strand at 54.961 kb on - strand at 54.962 kb on + strand at 54.962 kb on + strand at 54.962 kb on + strand at 54.962 kb on + strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.963 kb on - strand at 54.968 kb on + strand at 54.968 kb on + strand at 54.968 kb on + strand at 54.969 kb on - strand at 54.991 kb on - strand at 54.991 kb on - strand at 54.991 kb on - strand at 55.000 kb on - strand, within H281DRAFT_01216
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 52,535 + +0.5 52,536 - -0.9 52,536 - -0.3 52,558 + +1.4 52,558 + +1.9 52,563 + -0.1 52,660 + +0.5 52,661 - +0.3 52,718 - -0.3 52,916 + H281DRAFT_01212 0.43 -0.1 52,916 + H281DRAFT_01212 0.43 -0.6 52,916 + H281DRAFT_01212 0.43 +1.1 52,917 - H281DRAFT_01212 0.43 -1.7 52,917 - H281DRAFT_01212 0.43 -0.9 52,964 + H281DRAFT_01212 0.58 -0.1 52,964 + H281DRAFT_01212 0.58 +0.7 52,965 - H281DRAFT_01212 0.59 +1.1 53,010 + H281DRAFT_01212 0.73 +1.1 53,010 + H281DRAFT_01212 0.73 -0.2 53,011 - H281DRAFT_01212 0.73 +0.8 53,011 - +0.2 53,092 - +0.7 53,304 - H281DRAFT_01213 0.79 +0.6 53,307 + H281DRAFT_01213 0.80 +0.0 53,308 - H281DRAFT_01213 0.81 +1.2 53,318 + H281DRAFT_01213 0.86 +0.5 53,319 - H281DRAFT_01213 0.86 -0.4 53,319 - H281DRAFT_01213 0.86 +0.7 53,409 - -1.7 53,410 + +1.1 53,513 + H281DRAFT_01214 0.21 +0.7 53,513 + H281DRAFT_01214 0.21 -0.1 53,514 - H281DRAFT_01214 0.21 +0.0 53,514 - H281DRAFT_01214 0.21 +0.1 53,514 - H281DRAFT_01214 0.21 +1.9 53,572 + H281DRAFT_01214 0.30 +0.7 53,690 + H281DRAFT_01214 0.49 +0.6 53,821 + H281DRAFT_01214 0.69 -1.7 53,821 + H281DRAFT_01214 0.69 -0.9 53,853 + H281DRAFT_01214 0.74 +0.6 53,854 - H281DRAFT_01214 0.74 +0.1 54,118 - -0.3 54,189 - -1.4 54,200 + +0.2 54,200 + -0.7 54,200 + +0.5 54,317 - H281DRAFT_01215 0.45 +0.5 54,335 - H281DRAFT_01215 0.53 +0.1 54,567 - -0.6 54,570 + -0.7 54,570 + -0.6 54,570 + +1.5 54,589 - +0.0 54,595 - -0.1 54,946 + +0.3 54,946 + +0.9 54,947 - +0.2 54,947 - -0.2 54,956 + +0.6 54,956 + -1.1 54,957 - +0.4 54,960 + +0.9 54,960 + +1.6 54,960 + +1.2 54,960 + +0.5 54,960 + +0.5 54,961 - -0.5 54,961 - -0.1 54,961 - -1.2 54,961 - -0.8 54,962 + -0.0 54,962 + +0.6 54,962 + +0.1 54,962 + +0.5 54,963 - +0.6 54,963 - +0.0 54,963 - -0.6 54,963 - +0.3 54,963 - -0.4 54,963 - +0.7 54,968 + -1.0 54,968 + +0.1 54,968 + +0.2 54,969 - +0.0 54,991 - -3.3 54,991 - -0.4 54,991 - -0.0 55,000 - H281DRAFT_01216 0.13 +0.2
Or see this region's nucleotide sequence