Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01182 and H281DRAFT_01183 are separated by 11 nucleotides H281DRAFT_01183 and H281DRAFT_01184 are separated by 28 nucleotides H281DRAFT_01184 and H281DRAFT_01185 are separated by 131 nucleotides
H281DRAFT_01182: H281DRAFT_01182 - SnoaL-like domain-containing protein, at 18,877 to 19,449
_01182
H281DRAFT_01183: H281DRAFT_01183 - Sugar lactone lactonase YvrE, at 19,461 to 20,342
_01183
H281DRAFT_01184: H281DRAFT_01184 - 3-oxoacyl-[acyl-carrier protein] reductase, at 20,371 to 21,123
_01184
H281DRAFT_01185: H281DRAFT_01185 - MFS transporter, AAHS family, 4-hydroxybenzoate transporter, at 21,255 to 22,616
_01185
Position (kb) 20
21
22 Strain fitness (log2 ratio) -2
-1
0
1 at 19.935 kb on + strand at 19.941 kb on + strand, within H281DRAFT_01183 at 20.165 kb on + strand at 20.166 kb on - strand, within H281DRAFT_01183 at 20.284 kb on + strand at 20.660 kb on - strand at 20.886 kb on - strand, within H281DRAFT_01184 at 21.203 kb on + strand at 21.221 kb on + strand at 21.239 kb on - strand at 21.913 kb on + strand, within H281DRAFT_01185 at 21.920 kb on + strand, within H281DRAFT_01185 at 21.920 kb on + strand, within H281DRAFT_01185 at 22.072 kb on - strand, within H281DRAFT_01185
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 19,935 + +0.9 19,941 + H281DRAFT_01183 0.54 +0.8 20,165 + +0.9 20,166 - H281DRAFT_01183 0.80 -0.6 20,284 + +0.5 20,660 - +0.9 20,886 - H281DRAFT_01184 0.68 +1.2 21,203 + +0.3 21,221 + +0.9 21,239 - -1.9 21,913 + H281DRAFT_01185 0.48 +0.6 21,920 + H281DRAFT_01185 0.49 -0.1 21,920 + H281DRAFT_01185 0.49 +0.9 22,072 - H281DRAFT_01185 0.60 -0.3
Or see this region's nucleotide sequence