Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01181 and H281DRAFT_01182 are separated by 60 nucleotides H281DRAFT_01182 and H281DRAFT_01183 are separated by 11 nucleotides H281DRAFT_01183 and H281DRAFT_01184 are separated by 28 nucleotides
H281DRAFT_01181: H281DRAFT_01181 - Acyl-CoA synthetase (NDP forming), at 16,732 to 18,816
_01181
H281DRAFT_01182: H281DRAFT_01182 - SnoaL-like domain-containing protein, at 18,877 to 19,449
_01182
H281DRAFT_01183: H281DRAFT_01183 - Sugar lactone lactonase YvrE, at 19,461 to 20,342
_01183
H281DRAFT_01184: H281DRAFT_01184 - 3-oxoacyl-[acyl-carrier protein] reductase, at 20,371 to 21,123
_01184
Position (kb) 18
19
20 Strain fitness (log2 ratio) -1
0
1 at 18.128 kb on - strand, within H281DRAFT_01181 at 18.669 kb on + strand at 18.740 kb on + strand at 18.741 kb on - strand at 18.792 kb on - strand at 18.876 kb on + strand at 18.876 kb on + strand at 18.877 kb on - strand at 19.163 kb on - strand, within H281DRAFT_01182 at 19.235 kb on - strand, within H281DRAFT_01182 at 19.935 kb on + strand at 19.941 kb on + strand, within H281DRAFT_01183 at 20.165 kb on + strand at 20.166 kb on - strand, within H281DRAFT_01183 at 20.284 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 18,128 - H281DRAFT_01181 0.67 +0.1 18,669 + -0.8 18,740 + +0.0 18,741 - -1.4 18,792 - +0.3 18,876 + -0.4 18,876 + -1.5 18,877 - +0.9 19,163 - H281DRAFT_01182 0.50 +0.7 19,235 - H281DRAFT_01182 0.62 +0.3 19,935 + +0.9 19,941 + H281DRAFT_01183 0.54 +0.8 20,165 + +0.9 20,166 - H281DRAFT_01183 0.80 -0.6 20,284 + +0.5
Or see this region's nucleotide sequence