Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01027 and H281DRAFT_01028 are separated by 66 nucleotides H281DRAFT_01028 and H281DRAFT_01029 overlap by 1 nucleotides H281DRAFT_01029 and H281DRAFT_01030 are separated by 5 nucleotides
H281DRAFT_01027: H281DRAFT_01027 - gamma-glutamyltranspeptidase / glutathione hydrolase, at 1,153,728 to 1,155,365
_01027
H281DRAFT_01028: H281DRAFT_01028 - peptide/nickel transport system permease protein, at 1,155,432 to 1,156,316
_01028
H281DRAFT_01029: H281DRAFT_01029 - peptide/nickel transport system permease protein, at 1,156,316 to 1,157,260
_01029
H281DRAFT_01030: H281DRAFT_01030 - peptide/nickel transport system substrate-binding protein, at 1,157,266 to 1,158,762
_01030
Position (kb)
1156
1157
1158 Strain fitness (log2 ratio)
-1
0
1 at 1155.416 kb on + strand at 1155.417 kb on - strand at 1156.046 kb on - strand, within H281DRAFT_01028 at 1156.351 kb on - strand at 1156.351 kb on - strand at 1156.351 kb on - strand at 1156.351 kb on - strand at 1156.351 kb on - strand at 1156.761 kb on + strand, within H281DRAFT_01029 at 1156.761 kb on + strand, within H281DRAFT_01029 at 1156.762 kb on - strand, within H281DRAFT_01029 at 1157.367 kb on - strand at 1157.813 kb on + strand, within H281DRAFT_01030 at 1157.814 kb on - strand, within H281DRAFT_01030 at 1157.817 kb on - strand, within H281DRAFT_01030 at 1157.982 kb on - strand, within H281DRAFT_01030 at 1157.984 kb on + strand, within H281DRAFT_01030 at 1157.984 kb on + strand, within H281DRAFT_01030 at 1157.984 kb on + strand, within H281DRAFT_01030 at 1157.985 kb on - strand, within H281DRAFT_01030
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,155,416 + +0.2 1,155,417 - -0.4 1,156,046 - H281DRAFT_01028 0.69 -0.7 1,156,351 - +0.7 1,156,351 - -0.4 1,156,351 - -1.5 1,156,351 - -1.0 1,156,351 - +0.4 1,156,761 + H281DRAFT_01029 0.47 -0.5 1,156,761 + H281DRAFT_01029 0.47 -0.4 1,156,762 - H281DRAFT_01029 0.47 +0.5 1,157,367 - -0.4 1,157,813 + H281DRAFT_01030 0.37 +0.4 1,157,814 - H281DRAFT_01030 0.37 +1.2 1,157,817 - H281DRAFT_01030 0.37 +0.4 1,157,982 - H281DRAFT_01030 0.48 +0.7 1,157,984 + H281DRAFT_01030 0.48 +0.2 1,157,984 + H281DRAFT_01030 0.48 +0.8 1,157,984 + H281DRAFT_01030 0.48 -0.4 1,157,985 - H281DRAFT_01030 0.48 -0.0
Or see this region's nucleotide sequence