Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00944 and H281DRAFT_00945 are separated by 29 nucleotides H281DRAFT_00945 and H281DRAFT_00946 are separated by 56 nucleotides H281DRAFT_00946 and H281DRAFT_00947 overlap by 1 nucleotides
H281DRAFT_00944: H281DRAFT_00944 - putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase, at 1,049,727 to 1,051,124
_00944
H281DRAFT_00945: H281DRAFT_00945 - UDP-glucose dehydrogenase, at 1,051,154 to 1,052,602
_00945
H281DRAFT_00946: H281DRAFT_00946 - protein-tyrosine phosphatase, at 1,052,659 to 1,053,114
_00946
H281DRAFT_00947: H281DRAFT_00947 - polysaccharide export outer membrane protein, at 1,053,114 to 1,054,379
_00947
Position (kb) 1051
1052
1053 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1050.304 kb on - strand, within H281DRAFT_00944 at 1050.669 kb on - strand, within H281DRAFT_00944 at 1050.900 kb on + strand, within H281DRAFT_00944 at 1050.900 kb on + strand, within H281DRAFT_00944 at 1050.900 kb on + strand, within H281DRAFT_00944 at 1050.901 kb on - strand, within H281DRAFT_00944 at 1050.901 kb on - strand, within H281DRAFT_00944 at 1050.901 kb on - strand, within H281DRAFT_00944 at 1050.922 kb on - strand, within H281DRAFT_00944 at 1050.922 kb on - strand, within H281DRAFT_00944 at 1051.038 kb on + strand at 1051.039 kb on - strand at 1051.120 kb on - strand at 1051.148 kb on + strand at 1051.151 kb on + strand at 1051.151 kb on + strand at 1051.151 kb on + strand at 1051.152 kb on - strand at 1051.727 kb on + strand, within H281DRAFT_00945 at 1051.728 kb on - strand, within H281DRAFT_00945 at 1051.763 kb on + strand, within H281DRAFT_00945 at 1051.796 kb on + strand, within H281DRAFT_00945 at 1051.797 kb on - strand, within H281DRAFT_00945 at 1051.832 kb on + strand, within H281DRAFT_00945 at 1052.153 kb on - strand, within H281DRAFT_00945 at 1052.358 kb on + strand, within H281DRAFT_00945 at 1052.454 kb on - strand, within H281DRAFT_00945 at 1052.872 kb on + strand, within H281DRAFT_00946 at 1052.873 kb on - strand, within H281DRAFT_00946 at 1053.128 kb on + strand at 1053.142 kb on - strand at 1053.334 kb on - strand, within H281DRAFT_00947 at 1053.441 kb on + strand, within H281DRAFT_00947
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,050,304 - H281DRAFT_00944 0.41 +1.0 1,050,669 - H281DRAFT_00944 0.67 -0.8 1,050,900 + H281DRAFT_00944 0.84 -0.1 1,050,900 + H281DRAFT_00944 0.84 +0.3 1,050,900 + H281DRAFT_00944 0.84 -1.0 1,050,901 - H281DRAFT_00944 0.84 -0.6 1,050,901 - H281DRAFT_00944 0.84 -0.2 1,050,901 - H281DRAFT_00944 0.84 +0.5 1,050,922 - H281DRAFT_00944 0.85 +0.6 1,050,922 - H281DRAFT_00944 0.85 -0.3 1,051,038 + +1.2 1,051,039 - -0.7 1,051,120 - +0.6 1,051,148 + +2.0 1,051,151 + -0.1 1,051,151 + -0.4 1,051,151 + +0.2 1,051,152 - -0.2 1,051,727 + H281DRAFT_00945 0.40 +0.3 1,051,728 - H281DRAFT_00945 0.40 +0.4 1,051,763 + H281DRAFT_00945 0.42 +0.3 1,051,796 + H281DRAFT_00945 0.44 +0.3 1,051,797 - H281DRAFT_00945 0.44 +0.6 1,051,832 + H281DRAFT_00945 0.47 -0.4 1,052,153 - H281DRAFT_00945 0.69 +0.2 1,052,358 + H281DRAFT_00945 0.83 +0.2 1,052,454 - H281DRAFT_00945 0.90 +0.3 1,052,872 + H281DRAFT_00946 0.47 +1.3 1,052,873 - H281DRAFT_00946 0.47 +0.7 1,053,128 + +2.3 1,053,142 - -0.9 1,053,334 - H281DRAFT_00947 0.17 -2.1 1,053,441 + H281DRAFT_00947 0.26 +0.6
Or see this region's nucleotide sequence