Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00935 and H281DRAFT_00936 are separated by 31 nucleotides H281DRAFT_00936 and H281DRAFT_00937 are separated by 282 nucleotides
H281DRAFT_00935: H281DRAFT_00935 - trehalose 6-phosphate synthase, at 1,038,361 to 1,039,773
_00935
H281DRAFT_00936: H281DRAFT_00936 - Predicted ATPase, at 1,039,805 to 1,041,037
_00936
H281DRAFT_00937: H281DRAFT_00937 - Glycosyltransferase involved in cell wall bisynthesis, at 1,041,320 to 1,042,387
_00937
Position (kb)
1039
1040
1041
1042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1038.958 kb on + strand, within H281DRAFT_00935 at 1038.958 kb on + strand, within H281DRAFT_00935 at 1038.959 kb on - strand, within H281DRAFT_00935 at 1038.959 kb on - strand, within H281DRAFT_00935 at 1039.288 kb on - strand, within H281DRAFT_00935 at 1039.288 kb on - strand, within H281DRAFT_00935 at 1039.291 kb on + strand, within H281DRAFT_00935 at 1039.345 kb on + strand, within H281DRAFT_00935 at 1039.346 kb on - strand, within H281DRAFT_00935 at 1039.346 kb on - strand, within H281DRAFT_00935 at 1039.360 kb on + strand, within H281DRAFT_00935 at 1039.390 kb on + strand, within H281DRAFT_00935 at 1039.390 kb on + strand, within H281DRAFT_00935 at 1039.484 kb on - strand, within H281DRAFT_00935 at 1039.771 kb on + strand at 1039.858 kb on - strand at 1040.190 kb on - strand, within H281DRAFT_00936 at 1040.468 kb on + strand, within H281DRAFT_00936 at 1040.468 kb on + strand, within H281DRAFT_00936 at 1040.469 kb on - strand, within H281DRAFT_00936 at 1040.469 kb on - strand, within H281DRAFT_00936 at 1040.747 kb on + strand, within H281DRAFT_00936 at 1040.748 kb on - strand, within H281DRAFT_00936 at 1040.748 kb on - strand, within H281DRAFT_00936 at 1040.751 kb on + strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.752 kb on - strand, within H281DRAFT_00936 at 1040.794 kb on - strand, within H281DRAFT_00936 at 1040.799 kb on + strand, within H281DRAFT_00936 at 1040.803 kb on - strand, within H281DRAFT_00936 at 1040.803 kb on - strand, within H281DRAFT_00936 at 1041.085 kb on + strand at 1041.085 kb on + strand at 1041.086 kb on - strand at 1041.086 kb on - strand at 1041.086 kb on - strand at 1041.086 kb on - strand at 1041.086 kb on - strand at 1041.096 kb on + strand at 1041.097 kb on - strand at 1041.149 kb on + strand at 1041.150 kb on - strand at 1041.150 kb on - strand at 1041.281 kb on + strand at 1041.320 kb on - strand at 1041.371 kb on + strand at 1041.398 kb on + strand at 1041.398 kb on + strand at 1041.399 kb on - strand at 1041.608 kb on + strand, within H281DRAFT_00937 at 1041.611 kb on + strand, within H281DRAFT_00937 at 1041.807 kb on + strand, within H281DRAFT_00937 at 1041.807 kb on + strand, within H281DRAFT_00937 at 1041.807 kb on + strand, within H281DRAFT_00937 at 1041.807 kb on + strand, within H281DRAFT_00937 at 1041.808 kb on - strand, within H281DRAFT_00937 at 1041.809 kb on + strand, within H281DRAFT_00937 at 1041.810 kb on - strand, within H281DRAFT_00937 at 1041.810 kb on - strand at 1041.812 kb on - strand, within H281DRAFT_00937 at 1041.812 kb on - strand, within H281DRAFT_00937
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,038,958 + H281DRAFT_00935 0.42 +0.4 1,038,958 + H281DRAFT_00935 0.42 +0.4 1,038,959 - H281DRAFT_00935 0.42 -1.4 1,038,959 - H281DRAFT_00935 0.42 -2.5 1,039,288 - H281DRAFT_00935 0.66 +0.7 1,039,288 - H281DRAFT_00935 0.66 -0.1 1,039,291 + H281DRAFT_00935 0.66 +0.9 1,039,345 + H281DRAFT_00935 0.70 -0.8 1,039,346 - H281DRAFT_00935 0.70 -0.9 1,039,346 - H281DRAFT_00935 0.70 -0.2 1,039,360 + H281DRAFT_00935 0.71 -1.3 1,039,390 + H281DRAFT_00935 0.73 +0.1 1,039,390 + H281DRAFT_00935 0.73 -0.9 1,039,484 - H281DRAFT_00935 0.79 -0.3 1,039,771 + +0.7 1,039,858 - +1.1 1,040,190 - H281DRAFT_00936 0.31 +1.7 1,040,468 + H281DRAFT_00936 0.54 -0.5 1,040,468 + H281DRAFT_00936 0.54 -0.1 1,040,469 - H281DRAFT_00936 0.54 -0.5 1,040,469 - H281DRAFT_00936 0.54 -0.4 1,040,747 + H281DRAFT_00936 0.76 -1.0 1,040,748 - H281DRAFT_00936 0.76 +1.1 1,040,748 - H281DRAFT_00936 0.76 +1.1 1,040,751 + H281DRAFT_00936 0.77 -0.8 1,040,752 - H281DRAFT_00936 0.77 +2.4 1,040,752 - H281DRAFT_00936 0.77 +0.2 1,040,752 - H281DRAFT_00936 0.77 +0.6 1,040,752 - H281DRAFT_00936 0.77 -1.0 1,040,752 - H281DRAFT_00936 0.77 +1.7 1,040,794 - H281DRAFT_00936 0.80 +2.5 1,040,799 + H281DRAFT_00936 0.81 +0.1 1,040,803 - H281DRAFT_00936 0.81 -0.9 1,040,803 - H281DRAFT_00936 0.81 -1.6 1,041,085 + -1.3 1,041,085 + -1.2 1,041,086 - +0.3 1,041,086 - +0.1 1,041,086 - +0.7 1,041,086 - -0.2 1,041,086 - -0.4 1,041,096 + -2.0 1,041,097 - -0.6 1,041,149 + -1.0 1,041,150 - -2.2 1,041,150 - +0.0 1,041,281 + -0.1 1,041,320 - -1.5 1,041,371 + +0.6 1,041,398 + +0.5 1,041,398 + -1.0 1,041,399 - -2.5 1,041,608 + H281DRAFT_00937 0.27 -0.6 1,041,611 + H281DRAFT_00937 0.27 +0.0 1,041,807 + H281DRAFT_00937 0.46 -0.1 1,041,807 + H281DRAFT_00937 0.46 -0.1 1,041,807 + H281DRAFT_00937 0.46 -0.3 1,041,807 + H281DRAFT_00937 0.46 +0.7 1,041,808 - H281DRAFT_00937 0.46 +0.7 1,041,809 + H281DRAFT_00937 0.46 +1.2 1,041,810 - H281DRAFT_00937 0.46 -0.3 1,041,810 - +0.7 1,041,812 - H281DRAFT_00937 0.46 +0.7 1,041,812 - H281DRAFT_00937 0.46 +0.2
Or see this region's nucleotide sequence