Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00930 and H281DRAFT_00931 are separated by 70 nucleotides H281DRAFT_00931 and H281DRAFT_00932 are separated by 46 nucleotides H281DRAFT_00932 and H281DRAFT_00933 are separated by 176 nucleotides H281DRAFT_00933 and H281DRAFT_00934 are separated by 262 nucleotides
H281DRAFT_00930: H281DRAFT_00930 - phosphinothricin acetyltransferase, at 1,033,941 to 1,034,465
_00930
H281DRAFT_00931: H281DRAFT_00931 - TatD DNase family protein, at 1,034,536 to 1,035,330
_00931
H281DRAFT_00932: H281DRAFT_00932 - hypothetical protein, at 1,035,377 to 1,036,117
_00932
H281DRAFT_00933: H281DRAFT_00933 - hypothetical protein, at 1,036,294 to 1,036,650
_00933
H281DRAFT_00934: H281DRAFT_00934 - Small-conductance mechanosensitive channel, at 1,036,913 to 1,038,148
_00934
Position (kb)
1035
1036
1037 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1034.608 kb on - strand at 1034.704 kb on + strand, within H281DRAFT_00931 at 1034.821 kb on + strand, within H281DRAFT_00931 at 1034.822 kb on - strand, within H281DRAFT_00931 at 1034.822 kb on - strand, within H281DRAFT_00931 at 1034.929 kb on - strand, within H281DRAFT_00931 at 1034.955 kb on - strand, within H281DRAFT_00931 at 1035.055 kb on + strand, within H281DRAFT_00931 at 1035.056 kb on - strand, within H281DRAFT_00931 at 1035.193 kb on - strand, within H281DRAFT_00931 at 1035.193 kb on - strand, within H281DRAFT_00931 at 1035.205 kb on + strand, within H281DRAFT_00931 at 1035.215 kb on - strand, within H281DRAFT_00931 at 1035.366 kb on + strand at 1035.392 kb on - strand at 1035.392 kb on - strand at 1035.846 kb on - strand, within H281DRAFT_00932 at 1036.055 kb on + strand at 1036.055 kb on + strand at 1036.056 kb on - strand at 1036.057 kb on + strand at 1036.057 kb on + strand at 1036.421 kb on - strand, within H281DRAFT_00933 at 1036.421 kb on - strand, within H281DRAFT_00933 at 1036.421 kb on - strand, within H281DRAFT_00933 at 1036.456 kb on - strand, within H281DRAFT_00933 at 1036.473 kb on + strand, within H281DRAFT_00933 at 1036.477 kb on - strand, within H281DRAFT_00933 at 1036.499 kb on - strand, within H281DRAFT_00933 at 1036.547 kb on + strand, within H281DRAFT_00933 at 1036.555 kb on + strand, within H281DRAFT_00933 at 1036.555 kb on + strand, within H281DRAFT_00933 at 1036.555 kb on + strand, within H281DRAFT_00933 at 1036.556 kb on - strand, within H281DRAFT_00933 at 1036.556 kb on - strand, within H281DRAFT_00933 at 1036.648 kb on + strand at 1036.648 kb on + strand at 1036.648 kb on + strand at 1036.670 kb on + strand at 1036.782 kb on + strand at 1036.782 kb on + strand at 1036.924 kb on - strand at 1036.970 kb on - strand at 1036.970 kb on - strand at 1036.970 kb on - strand at 1036.970 kb on - strand at 1037.044 kb on + strand, within H281DRAFT_00934 at 1037.096 kb on + strand, within H281DRAFT_00934 at 1037.097 kb on - strand, within H281DRAFT_00934 at 1037.098 kb on + strand, within H281DRAFT_00934
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 1,034,608 - -1.2 1,034,704 + H281DRAFT_00931 0.21 -1.1 1,034,821 + H281DRAFT_00931 0.36 -2.1 1,034,822 - H281DRAFT_00931 0.36 +0.2 1,034,822 - H281DRAFT_00931 0.36 -0.4 1,034,929 - H281DRAFT_00931 0.49 -0.1 1,034,955 - H281DRAFT_00931 0.53 +0.1 1,035,055 + H281DRAFT_00931 0.65 +0.1 1,035,056 - H281DRAFT_00931 0.65 -1.0 1,035,193 - H281DRAFT_00931 0.83 -0.9 1,035,193 - H281DRAFT_00931 0.83 +0.2 1,035,205 + H281DRAFT_00931 0.84 +0.6 1,035,215 - H281DRAFT_00931 0.85 +2.3 1,035,366 + -0.6 1,035,392 - -0.9 1,035,392 - -0.6 1,035,846 - H281DRAFT_00932 0.63 -1.5 1,036,055 + +0.1 1,036,055 + +1.1 1,036,056 - -0.8 1,036,057 + -0.4 1,036,057 + -1.4 1,036,421 - H281DRAFT_00933 0.36 +0.6 1,036,421 - H281DRAFT_00933 0.36 +0.1 1,036,421 - H281DRAFT_00933 0.36 -1.0 1,036,456 - H281DRAFT_00933 0.45 -0.5 1,036,473 + H281DRAFT_00933 0.50 -1.3 1,036,477 - H281DRAFT_00933 0.51 -1.5 1,036,499 - H281DRAFT_00933 0.57 -2.0 1,036,547 + H281DRAFT_00933 0.71 -2.7 1,036,555 + H281DRAFT_00933 0.73 +0.8 1,036,555 + H281DRAFT_00933 0.73 -1.6 1,036,555 + H281DRAFT_00933 0.73 -0.1 1,036,556 - H281DRAFT_00933 0.73 -0.4 1,036,556 - H281DRAFT_00933 0.73 -1.6 1,036,648 + -1.0 1,036,648 + +0.2 1,036,648 + -0.0 1,036,670 + +0.3 1,036,782 + -2.7 1,036,782 + -0.3 1,036,924 - -0.1 1,036,970 - +0.4 1,036,970 - -0.1 1,036,970 - -0.3 1,036,970 - -0.2 1,037,044 + H281DRAFT_00934 0.11 -0.9 1,037,096 + H281DRAFT_00934 0.15 -0.1 1,037,097 - H281DRAFT_00934 0.15 +1.9 1,037,098 + H281DRAFT_00934 0.15 +0.2
Or see this region's nucleotide sequence