Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00874 and H281DRAFT_00875 are separated by 99 nucleotides H281DRAFT_00875 and H281DRAFT_00876 are separated by 50 nucleotides H281DRAFT_00876 and H281DRAFT_00877 are separated by 142 nucleotides H281DRAFT_00877 and H281DRAFT_00878 are separated by 98 nucleotides
H281DRAFT_00874: H281DRAFT_00874 - Bacteriophytochrome (light-regulated signal transduction histidine kinase), at 966,829 to 968,439
_00874
H281DRAFT_00875: H281DRAFT_00875 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 968,539 to 969,042
_00875
H281DRAFT_00876: H281DRAFT_00876 - PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3), at 969,093 to 971,066
_00876
H281DRAFT_00877: H281DRAFT_00877 - large conductance mechanosensitive channel, at 971,209 to 971,655
_00877
H281DRAFT_00878: H281DRAFT_00878 - threonine dehydratase, at 971,754 to 972,788
_00878
Position (kb) 969
970
971
972 Strain fitness (log2 ratio) -1
0
1 at 968.215 kb on + strand, within H281DRAFT_00874 at 968.216 kb on - strand, within H281DRAFT_00874 at 968.216 kb on - strand, within H281DRAFT_00874 at 968.216 kb on - strand, within H281DRAFT_00874 at 968.218 kb on + strand, within H281DRAFT_00874 at 968.219 kb on - strand, within H281DRAFT_00874 at 968.255 kb on - strand, within H281DRAFT_00874 at 968.255 kb on - strand, within H281DRAFT_00874 at 968.300 kb on + strand at 968.300 kb on + strand at 968.498 kb on - strand at 968.498 kb on - strand at 968.538 kb on + strand at 968.539 kb on - strand at 968.774 kb on + strand, within H281DRAFT_00875 at 968.775 kb on - strand, within H281DRAFT_00875 at 968.908 kb on + strand, within H281DRAFT_00875 at 968.909 kb on - strand, within H281DRAFT_00875 at 968.930 kb on - strand, within H281DRAFT_00875 at 968.934 kb on + strand, within H281DRAFT_00875 at 968.935 kb on - strand, within H281DRAFT_00875 at 968.961 kb on + strand, within H281DRAFT_00875 at 968.972 kb on + strand, within H281DRAFT_00875 at 969.061 kb on + strand at 969.061 kb on + strand at 969.061 kb on + strand at 969.062 kb on - strand at 969.074 kb on + strand at 969.075 kb on - strand at 969.276 kb on + strand at 969.277 kb on - strand at 969.448 kb on - strand, within H281DRAFT_00876 at 969.540 kb on + strand, within H281DRAFT_00876 at 969.624 kb on + strand, within H281DRAFT_00876 at 969.624 kb on + strand, within H281DRAFT_00876 at 969.624 kb on + strand, within H281DRAFT_00876 at 969.625 kb on - strand, within H281DRAFT_00876 at 969.722 kb on - strand, within H281DRAFT_00876 at 969.751 kb on - strand, within H281DRAFT_00876 at 969.769 kb on + strand, within H281DRAFT_00876 at 970.019 kb on - strand, within H281DRAFT_00876 at 970.205 kb on - strand, within H281DRAFT_00876 at 970.287 kb on + strand, within H281DRAFT_00876 at 970.288 kb on - strand, within H281DRAFT_00876 at 970.288 kb on - strand, within H281DRAFT_00876 at 970.288 kb on - strand, within H281DRAFT_00876 at 970.288 kb on - strand at 970.325 kb on - strand, within H281DRAFT_00876 at 970.377 kb on + strand, within H281DRAFT_00876 at 970.377 kb on + strand, within H281DRAFT_00876 at 970.378 kb on - strand, within H281DRAFT_00876 at 970.558 kb on + strand, within H281DRAFT_00876 at 970.558 kb on + strand, within H281DRAFT_00876 at 970.559 kb on - strand, within H281DRAFT_00876 at 970.559 kb on - strand, within H281DRAFT_00876 at 970.559 kb on - strand, within H281DRAFT_00876 at 970.838 kb on + strand, within H281DRAFT_00876 at 970.890 kb on + strand at 970.951 kb on + strand at 970.951 kb on + strand at 970.951 kb on + strand at 970.952 kb on - strand at 970.952 kb on - strand at 970.952 kb on - strand at 971.064 kb on + strand at 971.064 kb on + strand at 971.167 kb on + strand at 971.171 kb on - strand at 971.368 kb on - strand, within H281DRAFT_00877 at 971.431 kb on - strand, within H281DRAFT_00877 at 971.619 kb on + strand at 971.690 kb on - strand at 971.706 kb on + strand at 971.706 kb on + strand at 971.755 kb on + strand at 971.884 kb on - strand, within H281DRAFT_00878 at 972.019 kb on + strand, within H281DRAFT_00878 at 972.019 kb on + strand, within H281DRAFT_00878 at 972.020 kb on - strand, within H281DRAFT_00878 at 972.020 kb on - strand, within H281DRAFT_00878 at 972.020 kb on - strand, within H281DRAFT_00878
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 968,215 + H281DRAFT_00874 0.86 +0.4 968,216 - H281DRAFT_00874 0.86 -0.6 968,216 - H281DRAFT_00874 0.86 +0.2 968,216 - H281DRAFT_00874 0.86 +0.1 968,218 + H281DRAFT_00874 0.86 +0.8 968,219 - H281DRAFT_00874 0.86 +0.5 968,255 - H281DRAFT_00874 0.89 +0.7 968,255 - H281DRAFT_00874 0.89 -1.2 968,300 + +0.5 968,300 + +0.2 968,498 - +0.1 968,498 - -1.0 968,538 + +0.3 968,539 - +0.7 968,774 + H281DRAFT_00875 0.47 -1.2 968,775 - H281DRAFT_00875 0.47 +0.3 968,908 + H281DRAFT_00875 0.73 +0.2 968,909 - H281DRAFT_00875 0.73 +1.7 968,930 - H281DRAFT_00875 0.78 +1.0 968,934 + H281DRAFT_00875 0.78 +1.7 968,935 - H281DRAFT_00875 0.79 +0.1 968,961 + H281DRAFT_00875 0.84 +0.7 968,972 + H281DRAFT_00875 0.86 +0.7 969,061 + +0.1 969,061 + -1.0 969,061 + -0.7 969,062 - +0.7 969,074 + -0.1 969,075 - +0.7 969,276 + -0.9 969,277 - +0.0 969,448 - H281DRAFT_00876 0.18 -0.4 969,540 + H281DRAFT_00876 0.23 -0.3 969,624 + H281DRAFT_00876 0.27 +0.8 969,624 + H281DRAFT_00876 0.27 -0.2 969,624 + H281DRAFT_00876 0.27 -1.1 969,625 - H281DRAFT_00876 0.27 -0.2 969,722 - H281DRAFT_00876 0.32 +0.7 969,751 - H281DRAFT_00876 0.33 +1.4 969,769 + H281DRAFT_00876 0.34 +0.2 970,019 - H281DRAFT_00876 0.47 -0.8 970,205 - H281DRAFT_00876 0.56 +0.4 970,287 + H281DRAFT_00876 0.60 +0.2 970,288 - H281DRAFT_00876 0.61 -0.2 970,288 - H281DRAFT_00876 0.61 -0.3 970,288 - H281DRAFT_00876 0.61 -1.2 970,288 - +1.7 970,325 - H281DRAFT_00876 0.62 +0.0 970,377 + H281DRAFT_00876 0.65 -0.3 970,377 + H281DRAFT_00876 0.65 -0.5 970,378 - H281DRAFT_00876 0.65 +0.1 970,558 + H281DRAFT_00876 0.74 -0.2 970,558 + H281DRAFT_00876 0.74 +0.3 970,559 - H281DRAFT_00876 0.74 +0.2 970,559 - H281DRAFT_00876 0.74 +0.0 970,559 - H281DRAFT_00876 0.74 +1.2 970,838 + H281DRAFT_00876 0.88 -0.3 970,890 + +0.4 970,951 + -0.3 970,951 + -0.1 970,951 + -0.0 970,952 - -0.3 970,952 - +0.2 970,952 - +0.9 971,064 + -0.8 971,064 + +0.1 971,167 + +0.6 971,171 - +0.3 971,368 - H281DRAFT_00877 0.36 +0.5 971,431 - H281DRAFT_00877 0.50 +1.0 971,619 + +0.7 971,690 - -0.3 971,706 + -0.8 971,706 + +0.3 971,755 + +0.3 971,884 - H281DRAFT_00878 0.13 +0.2 972,019 + H281DRAFT_00878 0.26 +0.2 972,019 + H281DRAFT_00878 0.26 -0.7 972,020 - H281DRAFT_00878 0.26 +0.5 972,020 - H281DRAFT_00878 0.26 -0.2 972,020 - H281DRAFT_00878 0.26 +0.3
Or see this region's nucleotide sequence