Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00844 and H281DRAFT_00845 are separated by 4 nucleotides H281DRAFT_00845 and H281DRAFT_00846 are separated by 98 nucleotides H281DRAFT_00846 and H281DRAFT_00847 are separated by 130 nucleotides
H281DRAFT_00844: H281DRAFT_00844 - RNA polymerase, sigma 38 subunit, RpoS, at 933,067 to 934,146
_00844
H281DRAFT_00845: H281DRAFT_00845 - hypothetical protein, at 934,151 to 934,927
_00845
H281DRAFT_00846: H281DRAFT_00846 - 23S rRNA m(5)U-1939 methyltransferase, at 935,026 to 936,456
_00846
H281DRAFT_00847: H281DRAFT_00847 - Beta-barrel assembly machine subunit BamD, at 936,587 to 937,447
_00847
Position (kb) 935
936
937 Strain fitness (log2 ratio) -2
-1
0
1
2 at 934.436 kb on + strand, within H281DRAFT_00845 at 934.437 kb on - strand, within H281DRAFT_00845 at 934.493 kb on + strand, within H281DRAFT_00845 at 934.574 kb on + strand, within H281DRAFT_00845 at 934.574 kb on + strand, within H281DRAFT_00845 at 934.575 kb on - strand, within H281DRAFT_00845 at 934.575 kb on - strand, within H281DRAFT_00845 at 934.575 kb on - strand, within H281DRAFT_00845 at 934.629 kb on - strand, within H281DRAFT_00845 at 934.758 kb on - strand, within H281DRAFT_00845 at 934.780 kb on + strand, within H281DRAFT_00845 at 934.781 kb on - strand, within H281DRAFT_00845 at 934.781 kb on - strand, within H281DRAFT_00845 at 934.784 kb on + strand, within H281DRAFT_00845 at 934.785 kb on - strand, within H281DRAFT_00845 at 934.785 kb on - strand, within H281DRAFT_00845 at 934.794 kb on - strand, within H281DRAFT_00845 at 934.794 kb on - strand, within H281DRAFT_00845 at 934.794 kb on - strand, within H281DRAFT_00845 at 934.857 kb on + strand at 934.858 kb on - strand at 934.858 kb on - strand at 934.925 kb on + strand at 934.926 kb on - strand at 934.986 kb on - strand at 935.020 kb on + strand at 935.021 kb on - strand at 935.021 kb on - strand at 935.021 kb on - strand at 935.075 kb on - strand at 935.079 kb on + strand at 935.079 kb on + strand at 935.079 kb on + strand at 935.079 kb on + strand at 935.080 kb on - strand at 935.080 kb on - strand at 935.248 kb on + strand, within H281DRAFT_00846 at 935.341 kb on + strand, within H281DRAFT_00846 at 935.342 kb on - strand, within H281DRAFT_00846 at 935.589 kb on + strand, within H281DRAFT_00846 at 935.870 kb on - strand, within H281DRAFT_00846 at 935.870 kb on - strand, within H281DRAFT_00846 at 935.885 kb on - strand, within H281DRAFT_00846 at 935.967 kb on - strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.062 kb on + strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.063 kb on - strand, within H281DRAFT_00846 at 936.303 kb on + strand, within H281DRAFT_00846 at 936.304 kb on - strand, within H281DRAFT_00846 at 936.304 kb on - strand, within H281DRAFT_00846 at 936.310 kb on + strand, within H281DRAFT_00846 at 936.310 kb on + strand, within H281DRAFT_00846 at 936.311 kb on - strand, within H281DRAFT_00846 at 936.491 kb on + strand at 936.492 kb on - strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.536 kb on + strand at 936.537 kb on - strand at 936.588 kb on + strand at 936.589 kb on - strand at 936.639 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 934,436 + H281DRAFT_00845 0.37 +0.6 934,437 - H281DRAFT_00845 0.37 +0.5 934,493 + H281DRAFT_00845 0.44 +0.7 934,574 + H281DRAFT_00845 0.54 +1.0 934,574 + H281DRAFT_00845 0.54 +1.3 934,575 - H281DRAFT_00845 0.55 +0.4 934,575 - H281DRAFT_00845 0.55 -1.1 934,575 - H281DRAFT_00845 0.55 -0.8 934,629 - H281DRAFT_00845 0.62 -0.3 934,758 - H281DRAFT_00845 0.78 -0.4 934,780 + H281DRAFT_00845 0.81 +0.1 934,781 - H281DRAFT_00845 0.81 +0.0 934,781 - H281DRAFT_00845 0.81 -0.1 934,784 + H281DRAFT_00845 0.81 -0.7 934,785 - H281DRAFT_00845 0.82 -0.0 934,785 - H281DRAFT_00845 0.82 +1.4 934,794 - H281DRAFT_00845 0.83 +0.5 934,794 - H281DRAFT_00845 0.83 +0.1 934,794 - H281DRAFT_00845 0.83 -0.8 934,857 + -2.2 934,858 - +1.2 934,858 - -0.5 934,925 + -0.1 934,926 - +0.7 934,986 - +1.1 935,020 + +0.5 935,021 - -0.5 935,021 - +0.7 935,021 - -2.1 935,075 - +0.1 935,079 + +0.7 935,079 + -0.2 935,079 + +0.1 935,079 + -0.6 935,080 - -0.5 935,080 - -0.5 935,248 + H281DRAFT_00846 0.16 +0.4 935,341 + H281DRAFT_00846 0.22 -0.4 935,342 - H281DRAFT_00846 0.22 -0.0 935,589 + H281DRAFT_00846 0.39 +0.0 935,870 - H281DRAFT_00846 0.59 -1.3 935,870 - H281DRAFT_00846 0.59 +0.7 935,885 - H281DRAFT_00846 0.60 +0.0 935,967 - H281DRAFT_00846 0.66 -0.6 936,062 + H281DRAFT_00846 0.72 -0.4 936,062 + H281DRAFT_00846 0.72 -0.2 936,062 + H281DRAFT_00846 0.72 +0.4 936,063 - H281DRAFT_00846 0.72 -1.3 936,063 - H281DRAFT_00846 0.72 -0.2 936,063 - H281DRAFT_00846 0.72 -1.3 936,303 + H281DRAFT_00846 0.89 +0.2 936,304 - H281DRAFT_00846 0.89 -0.7 936,304 - H281DRAFT_00846 0.89 -0.1 936,310 + H281DRAFT_00846 0.90 +0.1 936,310 + H281DRAFT_00846 0.90 -0.4 936,311 - H281DRAFT_00846 0.90 -0.9 936,491 + +0.4 936,492 - -0.7 936,536 + +0.4 936,536 + +0.3 936,536 + +0.1 936,536 + +0.5 936,536 + +0.0 936,537 - -0.7 936,588 + -0.2 936,589 - +0.1 936,639 + +2.2
Or see this region's nucleotide sequence