Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00709 and H281DRAFT_00710 are separated by 166 nucleotides H281DRAFT_00710 and H281DRAFT_00711 are separated by 212 nucleotides H281DRAFT_00711 and H281DRAFT_00712 are separated by 305 nucleotides H281DRAFT_00712 and H281DRAFT_00713 are separated by 195 nucleotides
H281DRAFT_00709: H281DRAFT_00709 - transcriptional regulator, TetR family, at 797,600 to 798,259
_00709
H281DRAFT_00710: H281DRAFT_00710 - tRNA_Leu_CAG, at 798,426 to 798,512
_00710
H281DRAFT_00711: H281DRAFT_00711 - tRNA_Leu_CAG, at 798,725 to 798,811
_00711
H281DRAFT_00712: H281DRAFT_00712 - RNAse R, at 799,117 to 801,618
_00712
H281DRAFT_00713: H281DRAFT_00713 - 23S rRNA Gm-2251 2'-O-methyltransferase, at 801,814 to 802,557
_00713
Position (kb) 799
800
801
802 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 798.123 kb on + strand, within H281DRAFT_00709 at 798.124 kb on - strand, within H281DRAFT_00709 at 798.124 kb on - strand, within H281DRAFT_00709 at 798.179 kb on - strand, within H281DRAFT_00709 at 798.251 kb on + strand at 798.252 kb on - strand at 798.348 kb on + strand at 798.348 kb on + strand at 798.348 kb on + strand at 798.349 kb on - strand at 798.350 kb on + strand at 798.484 kb on - strand, within H281DRAFT_00710 at 798.538 kb on + strand at 798.594 kb on + strand at 798.595 kb on - strand at 798.595 kb on - strand at 798.685 kb on - strand at 798.697 kb on - strand at 798.839 kb on - strand at 798.925 kb on - strand at 798.958 kb on + strand at 798.959 kb on - strand at 798.973 kb on + strand at 799.044 kb on - strand at 799.088 kb on - strand at 799.203 kb on + strand at 799.801 kb on + strand, within H281DRAFT_00712 at 799.801 kb on + strand, within H281DRAFT_00712 at 799.980 kb on - strand, within H281DRAFT_00712 at 800.033 kb on - strand, within H281DRAFT_00712 at 800.089 kb on + strand, within H281DRAFT_00712 at 800.266 kb on + strand, within H281DRAFT_00712 at 800.266 kb on + strand, within H281DRAFT_00712 at 800.267 kb on - strand, within H281DRAFT_00712 at 800.269 kb on - strand, within H281DRAFT_00712 at 800.425 kb on + strand, within H281DRAFT_00712 at 800.426 kb on - strand, within H281DRAFT_00712 at 800.426 kb on - strand, within H281DRAFT_00712 at 800.426 kb on - strand, within H281DRAFT_00712 at 800.426 kb on - strand, within H281DRAFT_00712 at 800.426 kb on - strand, within H281DRAFT_00712 at 800.426 kb on - strand, within H281DRAFT_00712 at 800.765 kb on - strand, within H281DRAFT_00712 at 800.765 kb on - strand, within H281DRAFT_00712 at 800.809 kb on + strand, within H281DRAFT_00712 at 800.809 kb on + strand, within H281DRAFT_00712 at 801.097 kb on + strand, within H281DRAFT_00712 at 801.127 kb on + strand, within H281DRAFT_00712 at 801.238 kb on + strand, within H281DRAFT_00712 at 801.654 kb on - strand at 801.756 kb on + strand at 801.756 kb on + strand at 801.756 kb on + strand at 801.756 kb on + strand at 801.757 kb on - strand at 801.758 kb on + strand at 801.758 kb on + strand at 801.759 kb on - strand at 801.833 kb on + strand at 801.835 kb on + strand at 801.898 kb on + strand at 802.267 kb on + strand, within H281DRAFT_00713 at 802.267 kb on + strand, within H281DRAFT_00713 at 802.268 kb on - strand, within H281DRAFT_00713 at 802.363 kb on + strand, within H281DRAFT_00713 at 802.555 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 798,123 + H281DRAFT_00709 0.79 +0.0 798,124 - H281DRAFT_00709 0.79 +1.7 798,124 - H281DRAFT_00709 0.79 +0.1 798,179 - H281DRAFT_00709 0.88 -0.9 798,251 + +0.0 798,252 - +0.2 798,348 + +0.2 798,348 + +2.2 798,348 + +0.6 798,349 - -0.3 798,350 + -0.5 798,484 - H281DRAFT_00710 0.67 -1.7 798,538 + -0.9 798,594 + +0.1 798,595 - -1.8 798,595 - -0.7 798,685 - +0.2 798,697 - -0.6 798,839 - +0.2 798,925 - -0.5 798,958 + +1.1 798,959 - +0.2 798,973 + +0.0 799,044 - +1.2 799,088 - +1.0 799,203 + +0.5 799,801 + H281DRAFT_00712 0.27 +0.7 799,801 + H281DRAFT_00712 0.27 -0.5 799,980 - H281DRAFT_00712 0.34 +0.2 800,033 - H281DRAFT_00712 0.37 -1.0 800,089 + H281DRAFT_00712 0.39 +0.7 800,266 + H281DRAFT_00712 0.46 +0.5 800,266 + H281DRAFT_00712 0.46 +0.2 800,267 - H281DRAFT_00712 0.46 -1.0 800,269 - H281DRAFT_00712 0.46 +0.7 800,425 + H281DRAFT_00712 0.52 -0.3 800,426 - H281DRAFT_00712 0.52 -0.3 800,426 - H281DRAFT_00712 0.52 +1.8 800,426 - H281DRAFT_00712 0.52 +0.2 800,426 - H281DRAFT_00712 0.52 +1.0 800,426 - H281DRAFT_00712 0.52 -1.3 800,426 - H281DRAFT_00712 0.52 -1.5 800,765 - H281DRAFT_00712 0.66 +0.6 800,765 - H281DRAFT_00712 0.66 -0.5 800,809 + H281DRAFT_00712 0.68 +1.5 800,809 + H281DRAFT_00712 0.68 +0.5 801,097 + H281DRAFT_00712 0.79 +0.2 801,127 + H281DRAFT_00712 0.80 -0.5 801,238 + H281DRAFT_00712 0.85 -0.5 801,654 - +0.1 801,756 + -0.0 801,756 + +0.0 801,756 + -1.0 801,756 + -0.1 801,757 - +2.3 801,758 + -1.3 801,758 + +1.0 801,759 - -1.1 801,833 + -0.5 801,835 + -0.7 801,898 + +0.7 802,267 + H281DRAFT_00713 0.61 -3.7 802,267 + H281DRAFT_00713 0.61 +1.7 802,268 - H281DRAFT_00713 0.61 +0.6 802,363 + H281DRAFT_00713 0.74 -0.1 802,555 + +0.3
Or see this region's nucleotide sequence