Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00416 and H281DRAFT_00417 are separated by 49 nucleotides H281DRAFT_00417 and H281DRAFT_00418 overlap by 4 nucleotides H281DRAFT_00418 and H281DRAFT_00419 are separated by 47 nucleotides
H281DRAFT_00416: H281DRAFT_00416 - putative spermidine/putrescine transport system permease protein, at 457,353 to 458,258
_00416
H281DRAFT_00417: H281DRAFT_00417 - putative spermidine/putrescine transport system permease protein, at 458,308 to 459,132
_00417
H281DRAFT_00418: H281DRAFT_00418 - putative spermidine/putrescine transport system substrate-binding protein, at 459,129 to 460,208
_00418
H281DRAFT_00419: H281DRAFT_00419 - transcriptional regulator, LacI family, at 460,256 to 461,323
_00419
Position (kb) 459
460
461 Strain fitness (log2 ratio) -2
-1
0
1 at 458.247 kb on - strand at 458.439 kb on - strand, within H281DRAFT_00417 at 458.456 kb on - strand, within H281DRAFT_00417 at 458.574 kb on + strand, within H281DRAFT_00417 at 458.681 kb on + strand, within H281DRAFT_00417 at 458.687 kb on + strand, within H281DRAFT_00417 at 458.911 kb on + strand, within H281DRAFT_00417 at 459.120 kb on + strand at 459.120 kb on + strand at 459.148 kb on + strand at 459.215 kb on - strand at 459.386 kb on - strand, within H281DRAFT_00418 at 459.683 kb on - strand, within H281DRAFT_00418 at 459.788 kb on - strand, within H281DRAFT_00418 at 460.896 kb on + strand, within H281DRAFT_00419 at 460.897 kb on - strand, within H281DRAFT_00419 at 460.897 kb on - strand, within H281DRAFT_00419
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 458,247 - +1.4 458,439 - H281DRAFT_00417 0.16 -0.9 458,456 - H281DRAFT_00417 0.18 -0.1 458,574 + H281DRAFT_00417 0.32 +1.7 458,681 + H281DRAFT_00417 0.45 +0.8 458,687 + H281DRAFT_00417 0.46 -0.5 458,911 + H281DRAFT_00417 0.73 -0.5 459,120 + +0.8 459,120 + +0.4 459,148 + +0.2 459,215 - +0.4 459,386 - H281DRAFT_00418 0.24 -1.7 459,683 - H281DRAFT_00418 0.51 -2.1 459,788 - H281DRAFT_00418 0.61 +0.1 460,896 + H281DRAFT_00419 0.60 +0.7 460,897 - H281DRAFT_00419 0.60 -0.3 460,897 - H281DRAFT_00419 0.60 -1.0
Or see this region's nucleotide sequence