Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00277 and H281DRAFT_00278 are separated by 102 nucleotides H281DRAFT_00278 and H281DRAFT_00279 are separated by 94 nucleotides H281DRAFT_00279 and H281DRAFT_00280 overlap by 7 nucleotides
H281DRAFT_00277: H281DRAFT_00277 - Tfp pilus assembly protein PilF, at 297,592 to 299,337
_00277
H281DRAFT_00278: H281DRAFT_00278 - Outer membrane protein OmpA, at 299,440 to 300,090
_00278
H281DRAFT_00279: H281DRAFT_00279 - chorismate lyase, at 300,185 to 300,901
_00279
H281DRAFT_00280: H281DRAFT_00280 - G/U mismatch-specific uracil-DNA glycosylase, at 300,895 to 301,368
_00280
Position (kb) 299
300
301 Strain fitness (log2 ratio) -1
0
1
2
3 at 298.753 kb on - strand, within H281DRAFT_00277 at 298.753 kb on - strand, within H281DRAFT_00277 at 298.753 kb on - strand, within H281DRAFT_00277 at 298.793 kb on - strand, within H281DRAFT_00277 at 298.793 kb on - strand, within H281DRAFT_00277 at 298.793 kb on - strand, within H281DRAFT_00277 at 298.793 kb on - strand, within H281DRAFT_00277 at 298.793 kb on - strand, within H281DRAFT_00277 at 299.018 kb on - strand, within H281DRAFT_00277 at 299.088 kb on + strand, within H281DRAFT_00277 at 299.088 kb on + strand, within H281DRAFT_00277 at 299.417 kb on - strand at 299.441 kb on + strand at 299.549 kb on + strand, within H281DRAFT_00278 at 299.550 kb on - strand, within H281DRAFT_00278 at 299.550 kb on - strand, within H281DRAFT_00278 at 299.866 kb on - strand, within H281DRAFT_00278 at 300.487 kb on - strand, within H281DRAFT_00279 at 300.537 kb on - strand, within H281DRAFT_00279 at 300.537 kb on - strand, within H281DRAFT_00279 at 300.603 kb on - strand, within H281DRAFT_00279 at 300.742 kb on - strand, within H281DRAFT_00279 at 300.750 kb on + strand, within H281DRAFT_00279 at 300.751 kb on - strand, within H281DRAFT_00279 at 300.936 kb on + strand at 300.936 kb on + strand at 300.936 kb on + strand at 300.937 kb on - strand at 300.991 kb on + strand, within H281DRAFT_00280
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 298,753 - H281DRAFT_00277 0.66 -0.5 298,753 - H281DRAFT_00277 0.66 -0.1 298,753 - H281DRAFT_00277 0.66 -0.2 298,793 - H281DRAFT_00277 0.69 +0.9 298,793 - H281DRAFT_00277 0.69 -0.0 298,793 - H281DRAFT_00277 0.69 +0.6 298,793 - H281DRAFT_00277 0.69 +0.2 298,793 - H281DRAFT_00277 0.69 -0.7 299,018 - H281DRAFT_00277 0.82 -0.5 299,088 + H281DRAFT_00277 0.86 +0.2 299,088 + H281DRAFT_00277 0.86 -0.5 299,417 - +0.4 299,441 + -0.8 299,549 + H281DRAFT_00278 0.17 +0.8 299,550 - H281DRAFT_00278 0.17 +3.0 299,550 - H281DRAFT_00278 0.17 +0.1 299,866 - H281DRAFT_00278 0.65 +0.9 300,487 - H281DRAFT_00279 0.42 +0.4 300,537 - H281DRAFT_00279 0.49 -1.4 300,537 - H281DRAFT_00279 0.49 +0.4 300,603 - H281DRAFT_00279 0.58 +0.6 300,742 - H281DRAFT_00279 0.78 +2.5 300,750 + H281DRAFT_00279 0.79 -0.0 300,751 - H281DRAFT_00279 0.79 +0.5 300,936 + -0.3 300,936 + -0.2 300,936 + +0.3 300,937 - +0.0 300,991 + H281DRAFT_00280 0.20 +0.7
Or see this region's nucleotide sequence