Experiment: Deoxyribonucleic from herring sperm 10 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00220 and H281DRAFT_00221 are separated by 617 nucleotides H281DRAFT_00221 and H281DRAFT_00222 are separated by 42 nucleotides H281DRAFT_00222 and H281DRAFT_00223 overlap by 4 nucleotides
H281DRAFT_00220: H281DRAFT_00220 - Outer membrane protein (porin), at 239,354 to 240,475
_00220
H281DRAFT_00221: H281DRAFT_00221 - amino acid ABC transporter ATP-binding protein, PAAT family, at 241,093 to 241,872
_00221
H281DRAFT_00222: H281DRAFT_00222 - amino acid ABC transporter membrane protein 2, PAAT family, at 241,915 to 242,628
_00222
H281DRAFT_00223: H281DRAFT_00223 - amino acid ABC transporter membrane protein 1, PAAT family, at 242,625 to 243,314
_00223
Position (kb) 241
242 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 240.136 kb on + strand, within H281DRAFT_00220 at 240.136 kb on + strand, within H281DRAFT_00220 at 240.136 kb on + strand, within H281DRAFT_00220 at 240.137 kb on - strand, within H281DRAFT_00220 at 240.145 kb on + strand, within H281DRAFT_00220 at 240.369 kb on - strand at 240.369 kb on - strand at 240.373 kb on - strand at 240.399 kb on + strand at 240.399 kb on + strand at 240.399 kb on + strand at 240.400 kb on - strand at 240.512 kb on + strand at 240.581 kb on + strand at 240.581 kb on + strand at 240.711 kb on - strand at 240.724 kb on + strand at 240.886 kb on + strand at 240.912 kb on - strand at 240.912 kb on - strand at 240.942 kb on - strand at 241.007 kb on + strand at 241.086 kb on - strand at 241.086 kb on - strand at 241.893 kb on - strand at 242.000 kb on + strand, within H281DRAFT_00222 at 242.001 kb on - strand, within H281DRAFT_00222 at 242.040 kb on - strand, within H281DRAFT_00222 at 242.142 kb on - strand, within H281DRAFT_00222 at 242.144 kb on + strand, within H281DRAFT_00222 at 242.145 kb on - strand, within H281DRAFT_00222 at 242.190 kb on - strand, within H281DRAFT_00222 at 242.213 kb on + strand, within H281DRAFT_00222 at 242.280 kb on + strand, within H281DRAFT_00222 at 242.325 kb on + strand, within H281DRAFT_00222 at 242.326 kb on - strand, within H281DRAFT_00222 at 242.381 kb on + strand, within H281DRAFT_00222 at 242.404 kb on + strand, within H281DRAFT_00222 at 242.404 kb on + strand, within H281DRAFT_00222 at 242.438 kb on + strand, within H281DRAFT_00222 at 242.445 kb on - strand, within H281DRAFT_00222 at 242.588 kb on + strand at 242.589 kb on - strand at 242.629 kb on - strand at 242.671 kb on + strand at 242.843 kb on + strand, within H281DRAFT_00223
Per-strain Table
Position Strand Gene LocusTag Fraction Deoxyribonucleic from herring sperm 10 mg/mL (C) remove 240,136 + H281DRAFT_00220 0.70 +0.4 240,136 + H281DRAFT_00220 0.70 -0.3 240,136 + H281DRAFT_00220 0.70 +1.3 240,137 - H281DRAFT_00220 0.70 +0.6 240,145 + H281DRAFT_00220 0.70 -1.3 240,369 - +0.6 240,369 - +0.1 240,373 - +1.4 240,399 + +0.2 240,399 + -0.3 240,399 + -2.3 240,400 - -0.9 240,512 + +1.7 240,581 + -0.3 240,581 + +0.2 240,711 - -0.7 240,724 + +1.0 240,886 + +0.7 240,912 - -3.2 240,912 - -0.7 240,942 - -0.1 241,007 + -0.7 241,086 - +0.9 241,086 - -1.0 241,893 - -0.8 242,000 + H281DRAFT_00222 0.12 -0.7 242,001 - H281DRAFT_00222 0.12 -0.4 242,040 - H281DRAFT_00222 0.18 +1.2 242,142 - H281DRAFT_00222 0.32 -3.8 242,144 + H281DRAFT_00222 0.32 -0.5 242,145 - H281DRAFT_00222 0.32 +1.6 242,190 - H281DRAFT_00222 0.39 -0.3 242,213 + H281DRAFT_00222 0.42 -1.7 242,280 + H281DRAFT_00222 0.51 +0.1 242,325 + H281DRAFT_00222 0.57 -0.4 242,326 - H281DRAFT_00222 0.58 -1.0 242,381 + H281DRAFT_00222 0.65 +1.5 242,404 + H281DRAFT_00222 0.68 +0.7 242,404 + H281DRAFT_00222 0.68 -0.1 242,438 + H281DRAFT_00222 0.73 -0.3 242,445 - H281DRAFT_00222 0.74 +0.3 242,588 + -1.2 242,589 - -0.6 242,629 - +1.5 242,671 + -1.2 242,843 + H281DRAFT_00223 0.32 -1.1
Or see this region's nucleotide sequence