Strain Fitness in Dechlorosoma suillum PS around Dsui_2903

Experiment: T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2901 and Dsui_2902 are separated by 224 nucleotidesDsui_2902 and Dsui_2903 are separated by 31 nucleotidesDsui_2903 and Dsui_2904 are separated by 83 nucleotides Dsui_2901: Dsui_2901 - nicotinate-nucleotide pyrophosphorylase, at 3,104,578 to 3,105,462 _2901 Dsui_2902: Dsui_2902 - hypothetical protein, at 3,105,687 to 3,105,824 _2902 Dsui_2903: Dsui_2903 - methyltransferase family protein, at 3,105,856 to 3,106,476 _2903 Dsui_2904: Dsui_2904 - threonine synthase, at 3,106,560 to 3,107,999 _2904 Position (kb) 3105 3106 3107Strain fitness (log2 ratio) -1 0 1 2at 3105.511 kb on - strandat 3105.556 kb on + strandat 3105.598 kb on + strandat 3105.678 kb on + strandat 3105.772 kb on + strand, within Dsui_2902at 3105.812 kb on + strandat 3105.817 kb on + strandat 3105.887 kb on - strandat 3105.914 kb on + strandat 3105.992 kb on - strand, within Dsui_2903at 3106.055 kb on - strand, within Dsui_2903at 3106.163 kb on - strand, within Dsui_2903at 3106.178 kb on + strand, within Dsui_2903at 3106.345 kb on + strand, within Dsui_2903at 3106.345 kb on + strandat 3106.348 kb on - strand, within Dsui_2903at 3106.407 kb on - strand, within Dsui_2903at 3106.444 kb on - strandat 3106.478 kb on - strandat 3106.549 kb on + strandat 3106.566 kb on - strandat 3106.572 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction T0 transferred and grown anaerobically in PS minimal medium+ 10 mM ClO4 and 20 mM lactate
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3,105,511 - +0.4
3,105,556 + +0.5
3,105,598 + +0.1
3,105,678 + +1.0
3,105,772 + Dsui_2902 0.62 +2.7
3,105,812 + +0.7
3,105,817 + +0.7
3,105,887 - +0.0
3,105,914 + -0.6
3,105,992 - Dsui_2903 0.22 +1.2
3,106,055 - Dsui_2903 0.32 -0.1
3,106,163 - Dsui_2903 0.49 -0.2
3,106,178 + Dsui_2903 0.52 -0.8
3,106,345 + Dsui_2903 0.79 -1.3
3,106,345 + -1.7
3,106,348 - Dsui_2903 0.79 -0.1
3,106,407 - Dsui_2903 0.89 +1.5
3,106,444 - +1.0
3,106,478 - +0.4
3,106,549 + -0.2
3,106,566 - +1.4
3,106,572 - +0.6

Or see this region's nucleotide sequence